0.29 diversity_tm_05
La-Proteina (LD2) · Genie 3 short monomer generation diversity-tm-05 · Diversity, TM < 0.5
- Tested configuration
- La-Proteina (LD2)
- Protocol
- Genie 3 short monomer generation diversity-tm-05: Unconditional short monomer Diversity, TM < 0.5
- Dataset subset
- 500 generated monomers per run; lengths 50–250 in steps of 50; three runs (Genie 3 short monomer generation split)
- Procedure
- Unconditional short monomer generation: 100 structures at each length 50, 100, 150, 200 and 250 (500 samples per run); 3 repeated runs; Table 3 reports the authors’ average across runs. Designability uses minimum C-alpha scRMSD <2 angstrom across 8 ProteinMPNN sequences refolded with ESMFold. Diversity and novelty use FoldSeek release 10 (2025-01-19); exact definitions and reference sets in Appendix B.1. Method-specific checkpoints and sampling settings remain as Appendix B.2.
- Evaluation
- La-Proteina (LD2) on Genie 3 short monomer generation diversity-tm-05: Unconditional short monomer Diversity, TM < 0.5
- Coverage
- generated per run: 500; repeats: 3; note: Three repeated runs; metric-specific valid subsets not assigned a pooled denominator.
- Uncertainty
- Not reported
- Evidence
- Author-reported evaluation · source checkedGenie 3 primary paper v1, Table 3 · PDF page 20, Appendix B.3, Table 3, data row 8 (La-Proteina (LD2)), column Diversity, TM < 0.5
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: source checked. Source checked does not mean independently reproduced.
Reproduction
- Split
- Not reported
- Adaptation
- Not reported
- Scoring implementation
- Diversity, TM < 0.5
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evidence
Source checking verifies the cited claim or transcription. It does not establish independent reproduction.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Reported result 0.29 Individual claims | Genie 3 primary paper v1, Table 3 PDF page 20, Appendix B.3, Table 3, data row 8 (La-Proteina (LD2)), column Diversity, TM < 0.5 Version: 10.64898/2026.05.01.722168v1; posted 2026-05-05 | source checked Exact-string transcription of complete Table 3, checked against rendered primary PDF; no graph digitization or recomputation · 2026-09-23 author reported Audit detailsSource checked, not reproduced. Metrics differ by task, so no composite score across tasks is computed or implied. Field: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record Extraction artifact SHA-256: |
Sources and history
View linked audit checks and correction history
Release 2026-09-23-2b89723c6dd9 · Record review: source checked
1 source records and release history
- Genie 3 primary paper v1, Table 3 · Original source · 10.64898/2026.05.01.722168v1; posted 2026-05-05
Technical metadata and extraction receipts
Stable ID: genie3-2026-table3-result-la-proteina-ld2-diversity-tm-05-diversity-tm-05
- areas
- proteins-complexes
- tasks
- Unconditional short monomer Diversity, TM < 0.5
- metric
- diversity_tm_05
- metric direction
- higher
- unit
- reported score
- printed value
- 0.29
- numeric value
- 0.29
- uncertainty
- Not reported
- source locator
- PDF page 20, Appendix B.3, Table 3, data row 8 (La-Proteina (LD2)), column Diversity, TM < 0.5
- missing metadata
- denominator: unextracted; seeds: unreported
- review
- method: Exact-string transcription of complete Table 3, checked against rendered primary PDF; no graph digitization or recomputation; reviewer: Codex automated source review; date: 2026-09-23; artifact sha256: 43de8eab49ac74ad9141fbe955703a4e5f7879e0a83cbb547de37fc4e1d3e089; retrieval url: https://www.biorxiv.org/content/10.64898/2026.05.01.722168v1.full.pdf; notes: Source checked, not reproduced. Metrics differ by task, so no composite score across tasks is computed or implied.
- aggregation
- Mean over three repeated runs
- coverage
- generated per run: 500; repeats: 3; note: Three repeated runs; metric-specific valid subsets not assigned a pooled denominator.
- evidence overlap
- Five metrics from the same Table 3 generated sets are one evaluation setup; per-run Tables 4 and 5 repeat the same underlying experiment and are not independent evidence.