Paper-reported evidence

Residual-stream geometry of single-cell foundation models carries incremental gene-regulatory signal across tissues

2026 · Peer-reviewed · version of record

Paper-reported results. The values below come from this source, not an independent rewire.it run.

Open primary paper →DOI: 10.1186/s12859-026-06538-5

Primary full text verified via Europe PMC fullTextXML; venue: BMC Bioinformatics; PMC ID: PMC13418759. Score reflects scGPT plus paper geometry features, not raw scGPT.

1 verified numerical rows · source checked 2026-09-15

Paper-reportedAuthor's model

scGPT + residual geometry

gene-regulatory signal prediction

Reported score: 0.677
Metric: AUROC
Dataset / split: immune tissue

Asymmetric extraction, PCA-64 centered cosine geometry added to scGPT baseline

Table 4, Immune row, scGPT > +geom AUROC columnVerify at source →