Strengths and considerations
- A shared challenge resource supports comparison across the metagenomic analysis workflow.cami official source · Official CAMI home page: mission; Summary / Per category; CAMI III announcements
benchmark · task
CAMI taxonomic profiling
Estimate which taxa occur and their relative abundance.
At a glance
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Record type | Component taskcami official source · Official CAMI home page: mission; Summary / Per category; CAMI III announcements |
| Inputs | Sample-level taxon abundance profilescami official source · Official CAMI home page: mission; Summary / Per category; CAMI III announcements |
| Outputs and assessment | Presence and abundance agreement by rankcami official source · Official CAMI home page: mission; Summary / Per category; CAMI III announcements |
| Datasets | Not extracted or verified for this record. |
| Organisms | Not extracted or verified for this record. |
| Assays | Not extracted or verified for this record. |
| Splits | Not extracted or verified for this record. |
| Adaptation | Not extracted or verified for this record. |
| Baselines | Not extracted or verified for this record. |
How it works
Conceptual component-task overview. Exact data versions, split files and scorer settings must be taken from the source.
Read the diagram as text
- Sample-level taxon abundance profiles
- CAMI taxonomic profiling
- Presence and abundance agreement by rank
Procedure
This is the CAMI taxonomic profiling component, not the parent suite as a whole. Choose a challenge dataset and task, produce its required output and compare against the corresponding reference. Assembly, genome binning, taxonomic binning and abundance profiling are distinct evaluations.
cami official source · Official CAMI home page: mission; Summary / Per category; CAMI III announcementsConnected tasks and protocols
- CAMI · challenge · part of
These associations do not imply identical protocols or interchangeable scores.
Tested models and results
Release 2026-09-16-d74d282221a9 · 0 evaluations · 0 metric rows. Different protocols are not a single leaderboard.
No evaluations linked in this release.
Strengths and limitations
Limitations and conditions
- Challenge edition, taxonomy and reference corrections matter; records from different editions are not interchangeable.cami official source · Official CAMI home page: mission; Summary / Per category; CAMI III announcements
Profile review details
Existing catalogue evidence and cited extraction inspected. The specific protocol gaps listed here remain unresolved; numerical source checks do not constitute complete methods review.
Stable record: discovery-benchmark-cami-taxonomic-profilingApplicable tests and references
Applicability is distinct from a completed evaluation.
- Marker-based microbial profiling · proposed
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: discovered
- cami official source · Original source · Not reported
Technical metadata and extraction receipts
Stable ID: discovery-benchmark-cami-taxonomic-profiling
- areas
- microbiome
- entity level
- task
- missing metadata
- dataset release: unextracted; metric implementation: unextracted; split manifest: unextracted; version: unextracted
- scope note
- Specialist molecular or omics evaluation; protocol details require review before numerical comparison.
- task
- taxonomic profiling
- version
- Not reported
Related records
- parent: CAMI
- part of: CAMI
- applicable to: Marker-based microbial profiling
- subject: CAMI taxonomic profiling: part of CAMI