Strengths supported by sources
- Treats the choice of evaluation protocol as something to test explicitly.Virtual-Cell-Research-Community/scPertEval official source · README: introduction; Quick start
benchmark · evaluator
scPertEval
scPertEval examines evaluation protocols for single-cell perturbation predictions.
At a glance
Explanatory profile: source reviewed · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Record type | Evaluation software and protocol calibrationVirtual-Cell-Research-Community/scPertEval official source · README: introduction; Quick start |
| Inputs | Predicted and observed perturbation responsesVirtual-Cell-Research-Community/scPertEval official source · README: introduction; Quick start |
| Outputs and assessment | Protocol-dependent scores and control calibrationVirtual-Cell-Research-Community/scPertEval official source · README: introduction; Quick start |
| Datasets | Not extracted or verified for this record. |
| Organisms | Not extracted or verified for this record. |
| Assays | Not extracted or verified for this record. |
| Splits | Not extracted or verified for this record. |
| Adaptation | Not extracted or verified for this record. |
| Baselines | Not extracted or verified for this record. |
How it works
Conceptual overview of the cited procedure; consult the pinned source for executable settings.
Read the diagram as text
- Choose protocol components
- Score predictions
- Evaluate controls
- Report calibrated interpretation
Procedure
Specify the representation, metric, score transformation and reporting strategy. Use the software to score predictions or calibrate a protocol against its built-in controls.
Virtual-Cell-Research-Community/scPertEval official source · README: introduction; Quick startTested models and results
Release 2026-09-16-d74d282221a9 · 0 evaluations · 0 metric rows. Different protocols are not a single leaderboard.
No evaluations linked in this release.
Strengths and limitations
Limitations and conditions
- A score is not interpretable without its representation and transformation; the calibration controls are not new biological measurements.Virtual-Cell-Research-Community/scPertEval official source · README: introduction; Quick start
Profile review details
Primary-source description checked by an automated research assistant. This is a profile review, not an independent execution or numerical reproduction.
Stable record: discovery-benchmark-scpertevalApplicable tests and references
Applicability is distinct from a completed evaluation.
- Experimental replicate agreement · proposed
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: discovered
- Virtual-Cell-Research-Community/scPertEval official source · Original source · 4685f11927e887745737600170da7a655b727553
Technical metadata and extraction receipts
Stable ID: discovery-benchmark-scperteval
- areas
- single-cell
- entity level
- evaluator
- missing metadata
- dataset release: unextracted; metric implementation: unextracted; split manifest: unextracted; version: unextracted
- scope note
- Specialist molecular or omics evaluation; protocol details require review before numerical comparison.
- task
- Perturbation prediction metric calibration
- version
- Not reported
Related records
- applicable to: Experimental replicate agreement