This paper-specific evaluation tests protein-protein interaction prediction using Bernett PPI dataset.
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Record type | Paper-specific task; protocol incompletely extractedESM2_AMP: an interpretable framework for protein–protein interactions prediction and biological mechanism discovery · Table 4, ESM2_AMPS row, AUROC column |
| Inputs | Bernett PPI datasetESM2_AMP: an interpretable framework for protein–protein interactions prediction and biological mechanism discovery · Table 4, ESM2_AMPS row, AUROC column |
| Assessment | AUROCESM2_AMP: an interpretable framework for protein–protein interactions prediction and biological mechanism discovery · Table 4, ESM2_AMPS row, AUROC column |
| Recorded split or evaluation setting | UnextractedESM2_AMP: an interpretable framework for protein–protein interactions prediction and biological mechanism discovery · Table 4, ESM2_AMPS row, AUROC column |
| Datasets | Not extracted or verified for this record. |
| Organisms | Not extracted or verified for this record. |
| Assays | Not extracted or verified for this record. |
| Adaptation | Not extracted or verified for this record. |
| Baselines | Not extracted or verified for this record. |
Outline of the existing paper extraction. Split membership, fitting details and scorer implementation remain incompletely reviewed.
The existing paper extraction describes: ESM2-derived embeddings plus paper interaction predictor. This description is retained with the exact evaluation records; it is not a new protocol reconstruction.
ESM2_AMP: an interpretable framework for protein–protein interactions prediction and biological mechanism discovery · Table 4, ESM2_AMPS row, AUROC columnRelease 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| ESM2_AMPS: protein-protein interaction prediction ESM2-derived embeddings plus paper interaction predictor Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.68 AUROC Unit: fraction · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedESM2_AMP: an interpretable framework for protein–protein interactions prediction and biological mechanism discovery · Table 4, ESM2_AMPS row, AUROC column Source checking is not independent reproduction. |
Catalogue extraction inspected; protocol claims remain limited to the cited evidence. Missing details are not presumed absent from the original paper.
Stable record: reported-task-09c3100b77dcc5Release 2026-09-16-d74d282221a9 · Record review: needs review
Stable ID: reported-task-09c3100b77dcc5