This paper-specific evaluation tests Antibody–antigen interaction prediction using folded complexes using Antibody–antigen GEP test set.
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Record type | Paper-specific task; protocol incompletely extractedEnhancing antibody-antigen interaction prediction with atomic flexibility · Table 5, Folded row, Chai-1 (no MSA) column; Table 5, Folded row, Boltz-1 (no MSA) column |
| Inputs | Antibody–antigen GEP test setEnhancing antibody-antigen interaction prediction with atomic flexibility · Table 5, Folded row, Chai-1 (no MSA) column; Table 5, Folded row, Boltz-1 (no MSA) column |
| Assessment | AUC-ROCEnhancing antibody-antigen interaction prediction with atomic flexibility · Table 5, Folded row, Chai-1 (no MSA) column; Table 5, Folded row, Boltz-1 (no MSA) column |
| Recorded split or evaluation setting | UnextractedEnhancing antibody-antigen interaction prediction with atomic flexibility · Table 5, Folded row, Chai-1 (no MSA) column; Table 5, Folded row, Boltz-1 (no MSA) column |
| Datasets | Not extracted or verified for this record. |
| Organisms | Not extracted or verified for this record. |
| Assays | Not extracted or verified for this record. |
| Adaptation | Not extracted or verified for this record. |
| Baselines | Not extracted or verified for this record. |
Outline of the existing paper extraction. Split membership, fitting details and scorer implementation remain incompletely reviewed.
The existing paper extraction describes: Interaction classifier evaluated using Chai-1-folded input complexes; this is pipeline AUC, not DockQ.; Interaction classifier evaluated using Boltz-1-folded input complexes; this is pipeline AUC, not DockQ. This description is retained with the exact evaluation records; it is not a new protocol reconstruction.
Enhancing antibody-antigen interaction prediction with atomic flexibility · Table 5, Folded row, Chai-1 (no MSA) column; Table 5, Folded row, Boltz-1 (no MSA) columnRelease 2026-09-16-d74d282221a9 · 2 evaluations · 2 metric rows. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| Chai-1: Antibody–antigen interaction prediction using folded complexes Model: Chai-1 · Benchmark: Antibody–antigen interaction prediction using folded complexes · Dataset: Antibody–antigen GEP test set Interaction classifier evaluated using Chai-1-folded input complexes; this is pipeline AUC, not DockQ. Independent external evaluation · Evaluation metadata: needs review | ||
| 0.86 AUC-ROC Unit: unitless · Direction: unknown | Uncertainty: ± 0.07 Scored: Not reported · Eligible: Not reported | source checkedEnhancing antibody-antigen interaction prediction with atomic flexibility · Table 5, Folded row, Chai-1 (no MSA) column Source checking is not independent reproduction. |
| Boltz-1: Antibody–antigen interaction prediction using folded complexes Model: Boltz-1 · Benchmark: Antibody–antigen interaction prediction using folded complexes · Dataset: Antibody–antigen GEP test set Interaction classifier evaluated using Boltz-1-folded input complexes; this is pipeline AUC, not DockQ. Independent external evaluation · Evaluation metadata: needs review | ||
| 0.85 AUC-ROC Unit: unitless · Direction: unknown | Uncertainty: ± 0.05 Scored: Not reported · Eligible: Not reported | source checkedEnhancing antibody-antigen interaction prediction with atomic flexibility · Table 5, Folded row, Boltz-1 (no MSA) column Source checking is not independent reproduction. |
Catalogue extraction inspected; protocol claims remain limited to the cited evidence. Missing details are not presumed absent from the original paper.
Stable record: reported-task-0c92cda11228c4Release 2026-09-16-d74d282221a9 · Record review: needs review
Stable ID: reported-task-0c92cda11228c4