This paper-specific evaluation tests Enhancer classification using Genomic Benchmarks Mouse Enhancers.
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Record type | Paper-specific task; protocol incompletely extractedUnderstanding the natural language of DNA using encoder–decoder foundation models with byte-level precision · Table 2, Mouse Enhancers row, ENBED column; Table 2, Mouse Enhancers row, ENBED (GRCh38) column |
| Inputs | Genomic Benchmarks Mouse EnhancersUnderstanding the natural language of DNA using encoder–decoder foundation models with byte-level precision · Table 2, Mouse Enhancers row, ENBED column; Table 2, Mouse Enhancers row, ENBED (GRCh38) column |
| Assessment | AccuracyUnderstanding the natural language of DNA using encoder–decoder foundation models with byte-level precision · Table 2, Mouse Enhancers row, ENBED column; Table 2, Mouse Enhancers row, ENBED (GRCh38) column |
| Recorded split or evaluation setting | UnextractedUnderstanding the natural language of DNA using encoder–decoder foundation models with byte-level precision · Table 2, Mouse Enhancers row, ENBED column; Table 2, Mouse Enhancers row, ENBED (GRCh38) column |
| Datasets | Not extracted or verified for this record. |
| Organisms | Not extracted or verified for this record. |
| Assays | Not extracted or verified for this record. |
| Adaptation | Not extracted or verified for this record. |
| Baselines | Not extracted or verified for this record. |
Outline of the existing paper extraction. Split membership, fitting details and scorer implementation remain incompletely reviewed.
The existing paper extraction describes: Reported Genomic Benchmarks classification accuracy.; ENBED trained on GRCh38; reported Genomic Benchmarks classification accuracy. This description is retained with the exact evaluation records; it is not a new protocol reconstruction.
Understanding the natural language of DNA using encoder–decoder foundation models with byte-level precision · Table 2, Mouse Enhancers row, ENBED column; Table 2, Mouse Enhancers row, ENBED (GRCh38) columnRelease 2026-09-16-d74d282221a9 · 2 evaluations · 2 metric rows. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| ENBED: Enhancer classification Reported Genomic Benchmarks classification accuracy. Author-reported evaluation · Evaluation metadata: needs review | ||
| 90.3 Accuracy Unit: % · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedUnderstanding the natural language of DNA using encoder–decoder foundation models with byte-level precision · Table 2, Mouse Enhancers row, ENBED column Source checking is not independent reproduction. |
| ENBED (GRCh38): Enhancer classification Model: ENBED (GRCh38) · Benchmark: Enhancer classification · Dataset: Genomic Benchmarks Mouse Enhancers ENBED trained on GRCh38; reported Genomic Benchmarks classification accuracy. Author-reported evaluation · Evaluation metadata: needs review | ||
| 81.1 Accuracy Unit: % · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedUnderstanding the natural language of DNA using encoder–decoder foundation models with byte-level precision · Table 2, Mouse Enhancers row, ENBED (GRCh38) column Source checking is not independent reproduction. |
Catalogue extraction inspected; protocol claims remain limited to the cited evidence. Missing details are not presumed absent from the original paper.
Stable record: reported-task-132da895d4c381Release 2026-09-16-d74d282221a9 · Record review: needs review
Stable ID: reported-task-132da895d4c381