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benchmark · task

RNA compound-binding site prediction

This paper-specific evaluation tests RNA compound-binding site prediction using CoBRA compound-binding test set.

1 evaluations · 1 metric rows

At a glance

Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.

Data, procedure and scoring
PropertyDescription and evidence
Record typePaper-specific task; protocol incompletely extractedCoBRA: compound binding site prediction using RNA language model · Table 2, ERNIE-RNA / TCL focal row, MCC column
InputsCoBRA compound-binding test setCoBRA: compound binding site prediction using RNA language model · Table 2, ERNIE-RNA / TCL focal row, MCC column
AssessmentMCCCoBRA: compound binding site prediction using RNA language model · Table 2, ERNIE-RNA / TCL focal row, MCC column
Recorded split or evaluation settingtest setCoBRA: compound binding site prediction using RNA language model · Table 2, ERNIE-RNA / TCL focal row, MCC column
DatasetsNot extracted or verified for this record.
OrganismsNot extracted or verified for this record.
AssaysNot extracted or verified for this record.
AdaptationNot extracted or verified for this record.
BaselinesNot extracted or verified for this record.

How it works

Reported evaluation outline

Outline of the existing paper extraction. Split membership, fitting details and scorer implementation remain incompletely reviewed.

Reported evaluation outlineCoBRA compound-binding test set. Then: Recorded fitting or scoring procedure. Then: Assess MCCCoBRA compound-binding test setRecorded fitting or scoringprocedureAssess MCC
Read the diagram as text
  1. CoBRA compound-binding test set
  2. Recorded fitting or scoring procedure
  3. Assess MCC
CoBRA: compound binding site prediction using RNA language model · Table 2, ERNIE-RNA / TCL focal row, MCC column

Evaluation context

The existing paper extraction describes: ERNIE-RNA embedding with TCL focal loss. This description is retained with the exact evaluation records; it is not a new protocol reconstruction.

CoBRA: compound binding site prediction using RNA language model · Table 2, ERNIE-RNA / TCL focal row, MCC column

Tested models and results

Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.

Results grouped by the exact reported evaluation
Metric and findingCoverage and uncertaintyEvidence
ERNIE-RNA + CoBRA: RNA compound-binding site prediction

ERNIE-RNA embedding with TCL focal loss

Author-reported evaluation · Evaluation metadata: needs review

0.657 MCC

Unit: unitless · Direction: unknown

Uncertainty: not reported in legacy extract

Scored: Not reported · Eligible: Not reported

source checkedCoBRA: compound binding site prediction using RNA language model · Table 2, ERNIE-RNA / TCL focal row, MCC column

Source checking is not independent reproduction.

Strengths and limitations

Profile review details

Catalogue extraction inspected; protocol claims remain limited to the cited evidence. Missing details are not presumed absent from the original paper.

Stable record: reported-task-3a3bff34cce634

Sources and history

Release 2026-09-16-d74d282221a9 · Record review: needs review

Download this release
Technical metadata and extraction receipts

Stable ID: reported-task-3a3bff34cce634

areas
rna-transcriptomes
tasks
RNA compound-binding site prediction
entity level
task
version
Not reported
task
RNA compound-binding site prediction
scope note
Paper-specific evaluation task; protocol completeness requires further extraction.
missing metadata
protocol version: not_reported_in_legacy_extract
Related records

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