This paper-specific evaluation tests cell-type annotation using non-immune cells.
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Record type | Paper-specific task; protocol incompletely extractedGREmLN: A Cellular Graph Structure Aware Transcriptomics Foundation Model · Table 2, Cell type annotation(zero-shot), Non-immune cells, F1 row, GREmLN column |
| Inputs | non-immune cellsGREmLN: A Cellular Graph Structure Aware Transcriptomics Foundation Model · Table 2, Cell type annotation(zero-shot), Non-immune cells, F1 row, GREmLN column |
| Assessment | F1GREmLN: A Cellular Graph Structure Aware Transcriptomics Foundation Model · Table 2, Cell type annotation(zero-shot), Non-immune cells, F1 row, GREmLN column |
| Recorded split or evaluation setting | zero-shotGREmLN: A Cellular Graph Structure Aware Transcriptomics Foundation Model · Table 2, Cell type annotation(zero-shot), Non-immune cells, F1 row, GREmLN column |
| Datasets | Not extracted or verified for this record. |
| Organisms | Not extracted or verified for this record. |
| Assays | Not extracted or verified for this record. |
| Adaptation | Not extracted or verified for this record. |
| Baselines | Not extracted or verified for this record. |
Outline of the existing paper extraction. Split membership, fitting details and scorer implementation remain incompletely reviewed.
The existing paper extraction describes: Zero-shot cell-type annotation using pre-trained cellular graph foundation model. This description is retained with the exact evaluation records; it is not a new protocol reconstruction.
GREmLN: A Cellular Graph Structure Aware Transcriptomics Foundation Model · Table 2, Cell type annotation(zero-shot), Non-immune cells, F1 row, GREmLN columnRelease 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| GREmLN: cell-type annotation Zero-shot cell-type annotation using pre-trained cellular graph foundation model Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.937 F1 Unit: fraction · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedGREmLN: A Cellular Graph Structure Aware Transcriptomics Foundation Model · Table 2, Cell type annotation(zero-shot), Non-immune cells, F1 row, GREmLN column Source checking is not independent reproduction. |
Catalogue extraction inspected; protocol claims remain limited to the cited evidence. Missing details are not presumed absent from the original paper.
Stable record: reported-task-6312c8a7ac045eRelease 2026-09-16-d74d282221a9 · Record review: needs review
Stable ID: reported-task-6312c8a7ac045e