PPCOR · BEELINE 2020 Figure 5 · MHSC-GM
BEELINE 2020 Figure 5; MHSC-GM. Source checked, not independently reproduced.
Evaluation results
Release 2026-09-19-eb6149e5d766 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard. Charts retain each source table’s protocol and dataset.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| PPCOR · BEELINE 2020 Figure 5 · MHSC-GM Configuration: PPCORProtocol: BEELINE 2020 Figure 5 · MHSC-GM · {"reference_network":"Cell-type specific ChIP-Seq","gene_selection":"TFs+1000"}Dataset subset: MHSC-GM BEELINE 2020 Figure 5 Author-reported evaluation · Evaluation metadata: discovered | ||
| 0.96 Early Precision Ratio Unit: ratio · Direction: higher Aggregation: unreported | Uncertainty: status: unreported Scored: Not reported · Eligible: Not reported | source checkedBEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Figure 5 source CSV row 16, column 19 Source checking is not independent reproduction. |
Methods and reproduction
BEELINE 2020 Figure 5; MHSC-GM. Source checked, not independently reproduced.
- configuration
- PPCOR
- protocol
- BEELINE 2020 Figure 5 · MHSC-GM · {"reference_network":"Cell-type specific ChIP-Seq","gene_selection":"TFs+1000"}
- dataset subset
- MHSC-GM
- Split
- MHSC-GM
- Adaptation
- unreported
- Scoring implementation
- Not reported
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evaluation procedure
BEELINE 2020 Figure 5
- Configuration
- PPCOR
- Protocol
- BEELINE 2020 Figure 5 · MHSC-GM · {"reference_network":"Cell-type specific ChIP-Seq","gene_selection":"TFs+1000"}
- Dataset subset
- MHSC-GM
- origin
- Author-reported evaluation
- configuration
- Not reported
- protocol id
- acquired-protocol-408cb9c598ef659f51a6
- dataset version
- 10.1038/s41592-019-0690-6 source data published 2020
- split
- MHSC-GM
- population
- MHSC-GM
- inputs
- {"reference_network":"Cell-type specific ChIP-Seq","gene_selection":"TFs+1000"}
- adaptation
- unreported
- aggregation
- metric-specific; inspect each result
Metadata review: discovered. Unreported conditions prevent automatic comparisons.
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
20 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.adaptation unreported Context-only references | BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 Figure 5 source CSV row 16, column 19 Version: 10.1038/s41592-019-0690-6 source data published 2020 | missing or unspecified No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| attributes.comparison.aggregation metric-specific; inspect each result Context-only references | BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 Figure 5 source CSV row 16, column 19 Version: 10.1038/s41592-019-0690-6 source data published 2020 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| attributes.comparison.dataset_version 10.1038/s41592-019-0690-6 source data published 2020 Context-only references | BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 Figure 5 source CSV row 16, column 19 Version: 10.1038/s41592-019-0690-6 source data published 2020 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| attributes.comparison.inputs {"reference_network":"Cell-type specific ChIP-Seq","gene_selection":"TFs+1000"} Context-only references | BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 Figure 5 source CSV row 16, column 19 Version: 10.1038/s41592-019-0690-6 source data published 2020 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| attributes.comparison.population MHSC-GM Context-only references | BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 Figure 5 source CSV row 16, column 19 Version: 10.1038/s41592-019-0690-6 source data published 2020 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| attributes.comparison.protocol_id acquired-protocol-408cb9c598ef659f51a6 Context-only references | BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 Figure 5 source CSV row 16, column 19 Version: 10.1038/s41592-019-0690-6 source data published 2020 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| attributes.comparison.split MHSC-GM Context-only references | BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 Figure 5 source CSV row 16, column 19 Version: 10.1038/s41592-019-0690-6 source data published 2020 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| attributes.conditions.gene_selection TFs+1000 Context-only references | BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 Figure 5 source CSV row 16, column 19 Version: 10.1038/s41592-019-0690-6 source data published 2020 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| attributes.conditions.network_density_printed 0.51 Context-only references | BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 Figure 5 source CSV row 16, column 19 Version: 10.1038/s41592-019-0690-6 source data published 2020 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
| attributes.conditions.network_genes 640 Context-only references | BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 Figure 5 source CSV row 16, column 19 Version: 10.1038/s41592-019-0690-6 source data published 2020 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact downloaded bytes, before optional gzip storage |
Sources and history
View linked audit checks and correction history
Release 2026-09-19-eb6149e5d766 · Record review: discovered
1 source records and release history
- BEELINE: 10.1038/s41592-019-0690-6 source data published 2020 · Original source · 10.1038/s41592-019-0690-6 source data published 2020
Technical metadata and extraction receipts
Stable ID: acquired-evaluation-0e79684344c1cdb8c8f4
- origin
- author_reported
- protocol
- BEELINE 2020 Figure 5
- source locator
- Figure 5 source CSV row 16, column 19
- conditions
- gene selection: TFs+1000; network density printed: 0.51; network genes: 640; reference network: Cell-type specific ChIP-Seq; transcription factors: 16
- comparison
- protocol id: acquired-protocol-408cb9c598ef659f51a6; dataset version: 10.1038/s41592-019-0690-6 source data published 2020; split: MHSC-GM; population: MHSC-GM; inputs: {"reference_network":"Cell-type specific ChIP-Seq","gene_selection":"TFs+1000"}; adaptation: unreported; aggregation: metric-specific; inspect each result
- missing metadata
- checkpoint revision: unreported; scored count: unreported