evaluation · needs review
GTDB-Tk: Mock-community MAG taxonomy classification
Evaluation procedure
Genus classification of the same MAG set.
- Model
- GTDB-Tk
- Benchmark
- Mock-community MAG taxonomy classification
- Dataset
- Real mock community MAGs
- origin
- Independent external evaluation
- configuration
- Not reported
- protocol id
- Not reported
- dataset version
- Not reported
- split
- Not reported
- population
- Not reported
- inputs
- Not reported
- adaptation
- Not reported
- metric implementation
- Not reported
- aggregation
- Not reported
- budget
- Not reported
Metadata review: needs review. Unreported conditions prevent automatic comparisons.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| GTDB-Tk: Mock-community MAG taxonomy classification Model: GTDB-Tk · Benchmark: Mock-community MAG taxonomy classification · Dataset: Real mock community MAGs Genus classification of the same MAG set. Independent external evaluation · Evaluation metadata: needs review | ||
| 89.80 Genus-level F1 Unit: % · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedkMetaShot: a fast and reliable taxonomy classifier for metagenome-assembled genomes · Table 2, F1-score % row, Genus Gtk column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: needs review
- kMetaShot: a fast and reliable taxonomy classifier for metagenome-assembled genomes · Original source · PMC archival version PMC11695915.1
Technical metadata and extraction receipts
Stable ID: evaluation-lit-b3-030
- areas
- microbes-communities
- tasks
- Mock-community MAG taxonomy classification
- origin
- independent_paper
- protocol
- Genus classification of the same MAG set.
- version
- Not reported
- comparison
- protocol id: Not reported; dataset version: Not reported; split: Not reported; population: Not reported; inputs: Not reported; adaptation: Not reported; metric implementation: Not reported; aggregation: Not reported; budget: Not reported
- missing metadata
- model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract
Related records
- model: GTDB-Tk
- benchmark: Mock-community MAG taxonomy classification
- dataset: Real mock community MAGs
- evaluation: GTDB-Tk · Genus-level F1 · Real mock community MAGs