evaluation · needs review

Boltz-1: Protein–ligand pose prediction

Evaluation procedure

Highest-confidence pose from five samples; precomputed MSAs up to 4,096 sequences.

Metadata review: needs review. Unreported conditions prevent automatic comparisons.

Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.

Evaluated configurationMetricEvidence origin

Results grouped by the exact reported evaluation
Metric and finding	Coverage and uncertainty	Evidence
Boltz-1: Protein–ligand pose prediction Model: Boltz-1 · Benchmark: Protein–ligand pose prediction · Dataset: Boltz-1 structure test set Highest-confidence pose from five samples; precomputed MSAs up to 4,096 sequences. Author-reported evaluation · Evaluation metadata: needs review
0.545 Top-1 ligand RMSD <2 Å rate Unit: unitless · Direction: unknown	Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported	source checkedBoltz-1 Democratizing Biomolecular Interaction Modeling · Table 1, 3 recycling rounds / 200 steps row, L-RMSD <2Å top-1 column Source checking is not independent reproduction.

Release 2026-09-16-d74d282221a9 · Record review: needs review

Technical metadata and extraction receipts

Stable ID: evaluation-lit-b3-039

areas: molecular-interactions
tasks: Protein–ligand pose prediction
origin: author_reported
protocol: Highest-confidence pose from five samples; precomputed MSAs up to 4,096 sequences.
version: 3 recycling rounds; 200 diffusion steps
comparison: protocol id: Not reported; dataset version: Not reported; split: Not reported; population: Not reported; inputs: Not reported; adaptation: Not reported; metric implementation: Not reported; aggregation: Not reported; budget: Not reported
missing metadata: dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract

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