Tranception M on ProteinGym ZS-INDEL-SPEARMAN-DESIGNED: Zero-shot indels, designed or natural assays, Spearman
ProteinGym evaluation of Tranception M on Zero-shot indels, designed or natural assays, Spearman, scored with Spearman.
Methods and reproduction
ProteinGym evaluation of Tranception M on Zero-shot indels, designed or natural assays, Spearman, scored with Spearman.
- task
- ProteinGym ZS-INDEL-SPEARMAN-DESIGNED: Zero-shot indels, designed or natural assays, Spearman
- configuration
- Tranception M
- dataset subset
- ProteinGym indel DMS assays (ProteinGym split)
- Split
- Not reported
- Adaptation
- Not reported
- Scoring implementation
- Spearman
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evaluation procedure
Zero-shot scoring of insertion and deletion assays, split by how the test sequences were generated.
- Configuration
- Tranception M
- Task
- ProteinGym ZS-INDEL-SPEARMAN-DESIGNED: Zero-shot indels, designed or natural assays, Spearman
- Dataset subset
- ProteinGym indel DMS assays (ProteinGym split)
- origin
- Author-reported evaluation
- configuration
- Not reported
- protocol id
- proteingym-task-zs-indel-spearman-designed
- metric implementation
- Spearman
Metadata review: source checked. Unreported conditions prevent automatic comparisons.
Evaluation results
Release 2026-09-17-134cd1815de8 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard. Where several source tables report the same metric, the published comparisons above offer a pooled view that names what it does not hold constant.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| Tranception M on ProteinGym ZS-INDEL-SPEARMAN-DESIGNED: Zero-shot indels, designed or natural assays, Spearman Configuration: Tranception MTask: ProteinGym ZS-INDEL-SPEARMAN-DESIGNED: Zero-shot indels, designed or natural assays, SpearmanDataset subset: ProteinGym indel DMS assays (ProteinGym split) Zero-shot scoring of insertion and deletion assays, split by how the test sequences were generated. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.544 spearman Unit: correlation · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design · Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman) Source checking is not independent reproduction. |
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
10 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.metric_implementation Spearman Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.protocol_id proteingym-task-zs-indel-spearman-designed Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.origin author_reported Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.protocol Zero-shot scoring of insertion and deletion assays, split by how the test sequences were generated. Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman) Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| description ProteinGym evaluation of Tranception M on Zero-shot indels, designed or natural assays, Spearman, scored with Spearman. Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: benchmark proteingym-task-zs-indel-spearman-designed Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: dataset proteingym-dataset-proteingym-indel-dms-assays Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: model proteingym-method-tranception-m Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name Tranception M on ProteinGym ZS-INDEL-SPEARMAN-DESIGNED: Zero-shot indels, designed or natural assays, Spearman Context-only references | ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
Release 2026-09-17-134cd1815de8 · Record review: source checked
1 source records and release history
- ProteinGym: Large-Scale Benchmarks for Protein Fitness Prediction and Design · Original source · Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Technical metadata and extraction receipts
Stable ID: proteingym-evaluation-tranception-m-zs-indel-spearman-designed
- areas
- proteins-complexes
- tasks
- Zero-shot indels, designed or natural assays, Spearman
- origin
- author_reported
- protocol
- Zero-shot scoring of insertion and deletion assays, split by how the test sequences were generated.
- comparison
- protocol id: proteingym-task-zs-indel-spearman-designed; metric implementation: Spearman
- missing metadata
- checkpoint revision: unreported; seeds: unreported; budget: unreported; split manifest: unextracted
- source locator
- Table 4, row(Tranception M), column(Zero-shot indels, designed or natural assays, Spearman)