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model · method

ViennaRNA RNAfold

RNAfold predicts RNA secondary structure using thermodynamic calculations in the ViennaRNA package.

0 evaluations · 0 metric rows

At a glance

Explanatory profile: source reviewed · Automated source review, 2026-09-16. This does not change the review status of its results.

Inputs, outputs and configuration
PropertyDescription and evidence
Method classThermodynamic RNA foldingViennaRNA/ViennaRNA official source · README.md: Program descriptions, RNAfold row
Known versionsNot extracted or verified for this record.
Training dataNot extracted or verified for this record.
Context limitsNot extracted or verified for this record.
AccessNot extracted or verified for this record.
Code licenceNot extracted or verified for this record.
Weights licenceNot extracted or verified for this record.

How it works

Conceptual procedure

Schematic of the documented input, computation and output; not an executable configuration.

Conceptual procedureRNA sequence. Then: Thermodynamic model. Then: Energy / partition calculation. Then: Secondary-structure predictionRNA sequenceThermodynamic modelEnergy / partition calculationSecondary-structure prediction
Read the diagram as text
  1. RNA sequence
  2. Thermodynamic model
  3. Energy / partition calculation
  4. Secondary-structure prediction
ViennaRNA/ViennaRNA official source · README.md: Program descriptions, RNAfold row

An RNA sequence is processed using the selected energy model. The program calculates a minimum-free-energy secondary structure and can compute a partition function.

ViennaRNA/ViennaRNA official source · README.md: Program descriptions, RNAfold row

Benchmarks and results

Release 2026-09-16-d74d282221a9 · 0 evaluations · 0 metric rows. Different protocols are not a single leaderboard.

No evaluations linked in this release.

Strengths and limitations

Strengths supported by sources

Limitations and conditions

  • The energy parameterisation and folding options belong to the evaluated configuration; secondary structure is not a complete 3D structure.ViennaRNA/ViennaRNA official source · README.md: Program descriptions, RNAfold row
Profile review details

Primary project documentation or paper inspected for the explanatory claims and cited locations. Reviewed coverage concerns this narrative, not complete metadata, independent reproduction or a performance ranking.

Stable record: discovery-model-viennarna-rnafold

Applicable tests and references

Applicability is distinct from a completed evaluation.

  • BEACON · Proposed association

Sources and history

Release 2026-09-16-d74d282221a9 · Record review: discovered

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Technical metadata and extraction receipts

Stable ID: discovery-model-viennarna-rnafold

areas
rna
access
official_source_linked
benchmark applicability
candidate; not evidence of a reported evaluation
candidate benchmark ids
discovery-benchmark-beacon
entity level
method
missing metadata
checkpoint: unextracted; code licence: unextracted; parameters: unextracted; training cutoff: unextracted; training data: unextracted; version: unextracted; weights licence: unextracted
reported name
ViennaRNA RNAfold
version
Not reported
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