result · source checked
0.988 AUROC
GSMFormer-PPI + ProstT5 · AUROC · paper PPI test set
- Tested model
- GSMFormer-PPI + ProstT5
- Task or benchmark
- protein-protein interaction prediction
- Dataset
- paper PPI test set
- Procedure
- ProstT5 embeddings as graph node features
- Evaluation
- GSMFormer-PPI + ProstT5: protein-protein interaction prediction
- Evidence
- Author-reported evaluation · source checkedMultimodal graph, surface, and language-based model for protein protein interaction prediction · Table 6, ProstT5 embedding row, AUROC column
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| GSMFormer-PPI + ProstT5: protein-protein interaction prediction Model: GSMFormer-PPI + ProstT5 · Benchmark: protein-protein interaction prediction · Dataset: paper PPI test set ProstT5 embeddings as graph node features Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.988 AUROC Unit: fraction · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedMultimodal graph, surface, and language-based model for protein protein interaction prediction · Table 6, ProstT5 embedding row, AUROC column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: source checked
- Multimodal graph, surface, and language-based model for protein protein interaction prediction · Original source · journal full text in PMC
Technical metadata and extraction receipts
Stable ID: b2-gsmformer-ppi-2026
- areas
- proteins-complexes
- tasks
- protein-protein interaction prediction
- printed value
- 0.988
- numeric value
- 0.988
- metric
- AUROC
- metric direction
- unknown
- unit
- fraction
- uncertainty
- Not reported
- source locator
- Table 6, ProstT5 embedding row, AUROC column
- review
- method: independent_ai_table_review; reviewer: Codex secondary table review; reviewed at: 2026-09-16T10:38:57.558212+00:00; notes: Matched ProstT5 embedding row and AUROC column, 0.988. Caption explicitly describes GSMFormer-PPI using embeddings as node features, not standalone ProstT5 prediction.; evidence: Original PMC XML table headers, row groups and caption inspected; printed value 0.988.; artifact sha256: 9b364b5d73d16f2787f93f78f17dbe98b954ab9c2c64c1df960eec2e615eb3b4; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12873117/fullTextXML
- legacy id
- b2-gsmformer-ppi-2026
- legacy row
- id: b2-gsmformer-ppi-2026; paper id: gsmformer-ppi-2026; domain id: proteins-complexes; task: protein-protein interaction prediction; model: GSMFormer-PPI + ProstT5; model version: not stated in table; dataset: paper PPI test set; dataset version: Not reported; split: test set; metric: AUROC; value: 0.988; unit: fraction; uncertainty: Not reported; protocol: ProstT5 embeddings as graph node features; source locator: Table 6, ProstT5 embedding row, AUROC column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC12873117/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:33:26Z
- missing metadata
- dataset version: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract