0.343(0.001) mcrmse
UTRBERT-5mer · BEACON VDP · MCRMSE
- Tested configuration
- UTRBERT-5mer
- Task
- BEACON VDP: Vaccine degradation prediction
- Dataset subset
- OpenVaccine (BEACON split)
- Procedure
- BEACON harness, fixed downstream head per task. Train/validation/test 2,155/245/629; dataset OpenVaccine.
- Evaluation
- UTRBERT-5mer on BEACON VDP: Vaccine degradation prediction
- Evidence
- Author-reported evaluation · source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTRBERT-5mer),column(VDP)
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: source checked. Source checked does not mean independently reproduced.
Methods and reproduction
BEACON harness evaluation of UTRBERT-5mer on Vaccine degradation prediction, scored with MCRMSE.
- task
- BEACON VDP: Vaccine degradation prediction
- configuration
- UTRBERT-5mer
- dataset subset
- OpenVaccine (BEACON split)
- Split
- 2,155/245/629
- Adaptation
- Published pre-trained RNA language model, fine-tuned by the BEACON authors
- Scoring implementation
- MCRMSE
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evaluation results
Release 2026-09-17-1a18ca2c038a · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard. Where several source tables report the same metric, the published comparisons above offer a pooled view that names what it does not hold constant.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| UTRBERT-5mer on BEACON VDP: Vaccine degradation prediction Configuration: UTRBERT-5merTask: BEACON VDP: Vaccine degradation predictionDataset subset: OpenVaccine (BEACON split) BEACON harness, fixed downstream head per task. Train/validation/test 2,155/245/629; dataset OpenVaccine. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.343(0.001) mcrmse Unit: error · Direction: lower | Uncertainty: type: standard deviation; value: 0.001 Scored: Not reported · Eligible: Not reported | source checkedBEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Table3,p.8,row(UTRBERT-5mer),column(VDP) Source checking is not independent reproduction. |
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Reported result 0.343(0.001) Individual claims | BEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) Table3,p.8,row(UTRBERT-5mer),column(VDP) Version: v2, 12 December 2024 | source checked Deterministic parse of the pinned PDF text layer, with row and cell counts asserted and ten values cross-checked against the printed table · 2026-09-18 author reported Audit detailsSource checked, not reproduced. Metrics differ by task, so no composite score across tasks is computed or implied. Field: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record Extraction artifact SHA-256: |
Sources and history
Release 2026-09-17-1a18ca2c038a · Record review: source checked
1 source records and release history
- BEACON: Benchmark for Comprehensive RNA Tasks and Language Models (arXiv:2406.10391v2) · Original source · v2, 12 December 2024
Technical metadata and extraction receipts
Stable ID: beacon-result-utrbert-5mer-vdp-mcrmse
- areas
- rna-transcriptomes
- tasks
- Vaccine degradation prediction
- metric
- mcrmse
- metric direction
- lower
- unit
- error
- printed value
- 0.343(0.001)
- numeric value
- 0.343
- uncertainty
- type: standard_deviation; value: 0.001
- source locator
- Table3,p.8,row(UTRBERT-5mer),column(VDP)
- missing metadata
- denominator: unextracted; seeds: unreported
- review
- method: Deterministic parse of the pinned PDF text layer, with row and cell counts asserted and ten values cross-checked against the printed table; reviewer: Codex research agent; no human review claimed; date: 2026-09-18; artifact sha256: 1370d75fe591bb8f994bc67f100a1a3fd557a62b9edb962b21f2fb038e9dea16; retrieval url: https://arxiv.org/pdf/2406.10391; notes: Source checked, not reproduced. Metrics differ by task, so no composite score across tasks is computed or implied.