0.059 ±0.00 pearson_r
Remedis · HEST-Benchmark HCC · Pearson correlation
- Tested configuration
- Remedis
- Task
- HEST-Benchmark HCC: Gene expression prediction from histology, Hepatocellular carcinoma
- Dataset subset
- HEST-Benchmark HCC (HEST-Benchmark split)
- Procedure
- Random Forest regression with 70 trees over frozen patch features, averaged over folds or patients.
- Evaluation
- Remedis on HEST-Benchmark HCC: Gene expression prediction from histology, Hepatocellular carcinoma
- Evidence
- Author-reported evaluation · source checkedHEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis · Table 1, row(HCC), column(Remedis)
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: source checked. Source checked does not mean independently reproduced.
Methods and reproduction
HEST-Benchmark evaluation of Remedis on Gene expression prediction from histology, Hepatocellular carcinoma, scored with Pearson correlation.
- task
- HEST-Benchmark HCC: Gene expression prediction from histology, Hepatocellular carcinoma
- configuration
- Remedis
- dataset subset
- HEST-Benchmark HCC (HEST-Benchmark split)
- Split
- Not reported
- Adaptation
- Not reported
- Scoring implementation
- Pearson correlation
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evaluation results
Release 2026-09-17-134cd1815de8 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard. Where several source tables report the same metric, the published comparisons above offer a pooled view that names what it does not hold constant.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| Remedis on HEST-Benchmark HCC: Gene expression prediction from histology, Hepatocellular carcinoma Configuration: RemedisTask: HEST-Benchmark HCC: Gene expression prediction from histology, Hepatocellular carcinomaDataset subset: HEST-Benchmark HCC (HEST-Benchmark split) Random Forest regression with 70 trees over frozen patch features, averaged over folds or patients. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.059 ±0.00 pearson_r Unit: correlation · Direction: higher | Uncertainty: type: standard deviation; value: 0.00 Scored: Not reported · Eligible: Not reported | source checkedHEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis · Table 1, row(HCC), column(Remedis) Source checking is not independent reproduction. |
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
1 evidence row matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Reported result 0.059 ±0.00 Individual claims | HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis Table 1, row(HCC), column(Remedis) Version: Version pinned by URL and artifact SHA256 when available | source checked Deterministic parse of the pinned PDF text layer, stitching each cohort's value and spread lines with both counts asserted · 2026-09-18 author reported Audit detailsSource checked, not reproduced. Metrics differ by task, so no composite score across tasks is computed or implied. Field: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. Extraction artifact SHA-256: |
Sources and history
Release 2026-09-17-134cd1815de8 · Record review: source checked
1 source records and release history
- HEST-1k: A Dataset for Spatial Transcriptomics and Histology Image Analysis · Original source · Version pinned by URL and artifact SHA256 when available
Technical metadata and extraction receipts
Stable ID: hest-result-remedis-hcc-pearson-r
- areas
- cells-tissues
- tasks
- Gene expression prediction from histology, Hepatocellular carcinoma
- metric
- pearson_r
- metric direction
- higher
- unit
- correlation
- printed value
- 0.059 ±0.00
- numeric value
- 0.059
- uncertainty
- type: standard_deviation; value: 0.00
- source locator
- Table 1, row(HCC), column(Remedis)
- missing metadata
- denominator: unextracted; seeds: unreported
- review
- method: Deterministic parse of the pinned PDF text layer, stitching each cohort's value and spread lines with both counts asserted; reviewer: Codex research agent; no human review claimed; date: 2026-09-18; artifact sha256: 636099a73dee8337f60e6e9120230b914605b35553872ddf76e4661bbe14be9b; retrieval url: https://arxiv.org/pdf/2406.16192v1; notes: Source checked, not reproduced. Metrics differ by task, so no composite score across tasks is computed or implied.