Result

0.7345 F1

ESM2: F1 on Enzyme-pair functional identity: original held-out test

Tested configuration: ESM2
Protocol: Enzyme-pair functional identity: original held-out test (Enzyme functional identity prediction)
Dataset: FUJISAN test sub-dataset
Procedure: LightGBM FUJISAN and comparison methods; predictions thresholded to maximizeF 1. Protein-pair splitting is not evidence of disjoint proteins or families. 41,600 protein pairs; balanced functional-identity classes; random 56.25/18.75/25% training/validation/test split.
Evaluation: ESM2: Enzyme functional identity prediction
Evidence: Independent external evaluation · source checkedEnhanced prediction of protein functional identity through the integration of sequence and structural features · Table 1, row ESM2, column F1; XML row5 column6

A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.

Evaluation results

Release 2026-09-17-d277315f7d76 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.

Evaluation setupMetricEvidence origin

Results grouped by the exact reported evaluation
Metric and finding	Coverage and uncertainty	Evidence
ESM2: Enzyme functional identity prediction Configuration: ESM2Protocol: Enzyme-pair functional identity: original held-out test (Enzyme functional identity prediction)Dataset: FUJISAN test sub-dataset LightGBM FUJISAN and comparison methods; predictions thresholded to maximizeF 1. Protein-pair splitting is not evidence of disjoint proteins or families. 41,600 protein pairs; balanced functional-identity classes; random 56.25/18.75/25% training/validation/test split. Independent external evaluation · Evaluation metadata: needs review
0.7345 F1 Unit: dimensionless · Direction: higher	Uncertainty: unreported Scored: Not reported · Eligible: Not reported	source checkedEnhanced prediction of protein functional identity through the integration of sequence and structural features · Table 1, row ESM2, column F1; XML row5 column6 Source checking is not independent reproduction.

Evidence table

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-17-d277315f7d76
Property and statement	Original source and location	Review and provenance
Reported result 0.7345 Individual claims	Enhanced prediction of protein functional identity through the integration of sequence and structural features Original source ↗ Table 1, row ESM2, column F1; XML row5 column6 Version: PMC11609699.1 Retrieved: 2026-09-17T07:56:15.783679+00:00	source checked Primary-table transcription and separate automated source review · 2026-09-17 independent paper Audit details Source checked does not mean experimentally reproduced. Field: `attributes.printed_value` Source artifact SHA-256: `db33e0542005ffae00cd644dfe697185b94c8823d5aee2768620a6db0c48e56f` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact

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Sources and history

Release 2026-09-17-d277315f7d76 · Record review: source checked

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Technical metadata and extraction receipts

Stable ID: paper-result-b5897e7fb2d9f17e8c

areas: proteins-complexes
tasks: Enzyme functional identity prediction
printed value: 0.7345
numeric value: 0.7345
metric: F1
metric direction: higher
unit: dimensionless
uncertainty: Not reported
eligible count: Not reported
scored count: Not reported
reported population: Not reported
source locator: Table 1, row ESM2, column F1; XML row5 column6
source occurrences: source id: part2-fujisan-2024; locator: Table 1, row ESM2, column F1; XML row5 column6
review: method: Primary-table transcription and separate automated source review; date: 2026-09-17; note: Source checked does not mean experimentally reproduced.
missing metadata: scored count: unreported; eligible count: unextracted; checkpoint revision: unextracted; uncertainty: unreported

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evaluation: ESM2: Enzyme functional identity prediction

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