Task

ProteinBench IF-FITTING-EVOLUTION-DISTRIBUTION-CAMEO-AAR: Fitting Evolution Distribution, CAMEO AAR

Fitting Evolution Distribution, CAMEO AAR. Scored with AAR on CASP, CAMEO and de novo backbones. Inverse folding: recover a sequence for a given backbone. Values are the median over repeated runs.

2 evaluations · 2 metric rows

Overview

Fitting Evolution Distribution, CAMEO AAR. Scored with AAR on CASP, CAMEO and de novo backbones. Inverse folding: recover a sequence for a given backbone. Values are the median over repeated runs.

Consult the linked sources for architecture or protocol details. Missing evidence is not evidence of a missing capability.

Evaluation design

Benchmarks bring together tasks and protocols. A task describes the biological question; a protocol defines a particular test.

Benchmarks

ProteinBench

These source-backed links do not make different protocols or scores interchangeable.

Recorded evaluations

Each evaluation records what was tested and under which conditions.

Run instructions

No runnable recipe has been reviewed for this task. Dataset access, model requirements, licences and compute requirements must be checked against its sources before execution.

A task describes a biological question. Choose a linked protocol to obtain concrete split and scoring instructions.

Published comparisons

Explore the results reported under one evaluation protocol. Each figure keeps its source, dataset and metric together; it is not a ranking across studies. The pooled view gathers every source table that reports the same metric and names what it does not hold constant.

Comparison and metric

ProteinBench IF-FITTING-EVOLUTION-DISTRIBUTION-CAMEO-AAR: Fitting Evolution Distribution, CAMEO AAR

aar (score) · Higher values are better for this metric.

Every method ProteinBench reports on Fitting Evolution Distribution, CAMEO AAR, scored with AAR on CASP, CAMEO and de novo backbones.

Evaluation protocol · CASP, CAMEO and de novo backbones (ProteinBench split)

ProteinMPNN · Configuration · Author-reported evaluation0.468
LM-Design · Configuration · Author-reported evaluation0.570

Source order is preserved. Plotted marks show point estimates; uncertainty, where reported, is retained in the printed values and table. Differences do not establish statistical significance.

proteinbench primary benchmark evidence · Table 2, column(Fitting Evolution Distribution, CAMEO AAR ↑)

Values, uncertainty and evidence

aar: original source values
Tested entity	Printed value	Uncertainty	Evidence
ProteinMPNN · Configuration	0.468 score	Not reported	Author-reported evaluation · source checkedproteinbench primary benchmark evidence · Table 2, row(ProteinMPNN), column(Fitting Evolution Distribution, CAMEO AAR ↑)
LM-Design · Configuration	0.570 score	Not reported	Author-reported evaluation · source checkedproteinbench primary benchmark evidence · Table 2, row(LM-Design), column(Fitting Evolution Distribution, CAMEO AAR ↑)

Scope and limitations

Author-reported numbers, source checked but not independently reproduced.
Many of these metrics are better when lower, including scRMSD, perplexity and binding energy. The direction comes from the arrow in the paper's own header.
Rows such as Native PDBs and RAbD are the natural reference the authors include for scale, not a competing method.

Source transcription and grouping reviewed by automated source review on 2026-09-18. These experiments were not independently reproduced by rewire.

Tested entities and results

Release 2026-09-17-134cd1815de8 · 2 evaluations · 2 metric rows. Different protocols are not a single leaderboard. Where several source tables report the same metric, the published comparisons above offer a pooled view that names what it does not hold constant.

Evaluation setupMetricEvidence origin

Results grouped by the exact reported evaluation
Metric and finding	Coverage and uncertainty	Evidence
LM-Design on ProteinBench IF-FITTING-EVOLUTION-DISTRIBUTION-CAMEO-AAR: Fitting Evolution Distribution, CAMEO AAR Configuration: LM-DesignTask: ProteinBench IF-FITTING-EVOLUTION-DISTRIBUTION-CAMEO-AAR: Fitting Evolution Distribution, CAMEO AARDataset subset: CASP, CAMEO and de novo backbones (ProteinBench split) Inverse folding: recover a sequence for a given backbone. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked
0.570 aar Unit: score · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedproteinbench primary benchmark evidence · Table 2, row(LM-Design), column(Fitting Evolution Distribution, CAMEO AAR ↑) Source checking is not independent reproduction.
ProteinMPNN on ProteinBench IF-FITTING-EVOLUTION-DISTRIBUTION-CAMEO-AAR: Fitting Evolution Distribution, CAMEO AAR Configuration: ProteinMPNNTask: ProteinBench IF-FITTING-EVOLUTION-DISTRIBUTION-CAMEO-AAR: Fitting Evolution Distribution, CAMEO AARDataset subset: CASP, CAMEO and de novo backbones (ProteinBench split) Inverse folding: recover a sequence for a given backbone. Values are the median over repeated runs. Author-reported evaluation · Evaluation metadata: source checked
0.468 aar Unit: score · Direction: higher	Uncertainty: Not reported Scored: Not reported · Eligible: Not reported	source checkedproteinbench primary benchmark evidence · Table 2, row(ProteinMPNN), column(Fitting Evolution Distribution, CAMEO AAR ↑) Source checking is not independent reproduction.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

1 evidence row matching the loaded filters

Claims, original sources and review scope · Release 2026-09-17-134cd1815de8
Property and statement	Original source and location	Review and provenance
Relationship: part of discovery-benchmark-proteinbench Individual claims	proteinbench primary benchmark evidence Original source ↗ Table 2, column(Fitting Evolution Distribution, CAMEO AAR ↑) Version: 2409.06744v1 Retrieved: 2026-09-16T21:07:13.231727+00:00	source checked automated source review · 2026-09-18 Audit details Primary-source transcription with no human sign-off and no independent reproduction. Field: `links:part_of:discovery-benchmark-proteinbench` Claim: proteinbench-association-if-fitting-evolution-distribution-cameo-aar Source artifact SHA-256: `4334d636223ad42bfb9ae68aae03f5a255c29ba1cebe7b8f9588fb3b9b5453b2` Hash scope: Exact retrieved primary paper artifact bytes. Inspected artifact

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Sources and history

Release 2026-09-17-134cd1815de8 · Record review: source checked

1 source records and release history

proteinbench primary benchmark evidence · Original source · 2409.06744v1

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Technical metadata and extraction receipts

Stable ID: proteinbench-task-if-fitting-evolution-distribution-cameo-aar

areas: proteins-complexes
tasks: Fitting Evolution Distribution, CAMEO AAR
metric: AAR
metric direction: higher
dataset: CASP, CAMEO and de novo backbones
protocol: Inverse folding: recover a sequence for a given backbone. Values are the median over repeated runs.
source locator: Table 2, column(Fitting Evolution Distribution, CAMEO AAR ↑)
comparison panels: id: proteinbench-panel-if-fitting-evolution-distribution-cameo-aar; title: ProteinBench IF-FITTING-EVOLUTION-DISTRIBUTION-CAMEO-AAR: Fitting Evolution Distribution, CAMEO AAR; protocol id: proteinbench-task-if-fitting-evolution-distribution-cameo-aar; dataset id: proteinbench-dataset-casp-cameo-and-de-novo-backbones; metric: aar; unit: score; direction: higher; result ids: proteinbench-result-proteinmpnn-if-fitting-evolution-distribution-cameo-aar-aar; proteinbench-result-lm-design-if-fitting-evolution-distribution-cameo-aar-aar; source ids: expansion-p3-proteinbench; source locator: Table 2, column(Fitting Evolution Distribution, CAMEO AAR ↑); context: Every method ProteinBench reports on Fitting Evolution Distribution, CAMEO AAR, scored with AAR on CASP, CAMEO and de novo backbones.; caveats: Author-reported numbers, source checked but not independently reproduced.; Many of these metrics are better when lower, including scRMSD, perplexity and binding energy. The direction comes from the arrow in the paper's own header.; Rows such as Native PDBs and RAbD are the natural reference the authors include for scale, not a competing method.; review: method: automated_source_review; date: 2026-09-18

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