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Mean ribosome load from MPRA

This paper-specific evaluation tests Mean ribosome load from MPRA using mRNABench MRL-MPRA.

2 evaluations · 2 metric rows

At a glance

Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.

Data, procedure and scoring
PropertyDescription and evidence
Record typePaper-specific task; protocol incompletely extractedmRNABench: A curated benchmark for mature mRNA property and function prediction · Table 2, RiNALMo row, MRL MPRA column; Table 2, RNA-FM row, MRL MPRA column
InputsmRNABench MRL-MPRAmRNABench: A curated benchmark for mature mRNA property and function prediction · Table 2, RiNALMo row, MRL MPRA column; Table 2, RNA-FM row, MRL MPRA column
AssessmentPearson RmRNABench: A curated benchmark for mature mRNA property and function prediction · Table 2, RiNALMo row, MRL MPRA column; Table 2, RNA-FM row, MRL MPRA column
Recorded split or evaluation settingUnextractedmRNABench: A curated benchmark for mature mRNA property and function prediction · Table 2, RiNALMo row, MRL MPRA column; Table 2, RNA-FM row, MRL MPRA column
DatasetsNot extracted or verified for this record.
OrganismsNot extracted or verified for this record.
AssaysNot extracted or verified for this record.
AdaptationNot extracted or verified for this record.
BaselinesNot extracted or verified for this record.

How it works

Reported evaluation outline

Outline of the existing paper extraction. Split membership, fitting details and scorer implementation remain incompletely reviewed.

Reported evaluation outlinemRNABench MRL-MPRA. Then: Recorded fitting or scoring procedure. Then: Assess Pearson RmRNABench MRL-MPRARecorded fitting or scoringprocedureAssess Pearson R
Read the diagram as text
  1. mRNABench MRL-MPRA
  2. Recorded fitting or scoring procedure
  3. Assess Pearson R
mRNABench: A curated benchmark for mature mRNA property and function prediction · Table 2, RiNALMo row, MRL MPRA column; Table 2, RNA-FM row, MRL MPRA column

Evaluation context

The existing paper extraction describes: Linear probe; mean across ten random seeds. This description is retained with the exact evaluation records; it is not a new protocol reconstruction.

mRNABench: A curated benchmark for mature mRNA property and function prediction · Table 2, RiNALMo row, MRL MPRA column; Table 2, RNA-FM row, MRL MPRA column

Tested models and results

Release 2026-09-16-d74d282221a9 · 2 evaluations · 2 metric rows. Different protocols are not a single leaderboard.

Results grouped by the exact reported evaluation
Metric and findingCoverage and uncertaintyEvidence
RiNALMo: Mean ribosome load from MPRA

Linear probe; mean across ten random seeds.

Independent external evaluation · Evaluation metadata: needs review

0.74 Pearson R

Unit: unitless · Direction: unknown

Uncertainty: not reported in legacy extract

Scored: Not reported · Eligible: Not reported

source checkedmRNABench: A curated benchmark for mature mRNA property and function prediction · Table 2, RiNALMo row, MRL MPRA column

Source checking is not independent reproduction.

RNA-FM: Mean ribosome load from MPRA

Linear probe; mean across ten random seeds.

Independent external evaluation · Evaluation metadata: needs review

0.49 Pearson R

Unit: unitless · Direction: unknown

Uncertainty: not reported in legacy extract

Scored: Not reported · Eligible: Not reported

source checkedmRNABench: A curated benchmark for mature mRNA property and function prediction · Table 2, RNA-FM row, MRL MPRA column

Source checking is not independent reproduction.

Strengths and limitations

Profile review details

Catalogue extraction inspected; protocol claims remain limited to the cited evidence. Missing details are not presumed absent from the original paper.

Stable record: reported-task-57dc3dcdb67a81

Sources and history

Release 2026-09-16-d74d282221a9 · Record review: needs review

Download this release
Technical metadata and extraction receipts

Stable ID: reported-task-57dc3dcdb67a81

areas
rna-transcriptomes
tasks
Mean ribosome load from MPRA
entity level
task
version
Not reported
task
Mean ribosome load from MPRA
scope note
Paper-specific evaluation task; protocol completeness requires further extraction.
missing metadata
protocol version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract
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