result · source checked
0.74 Pearson R
RiNALMo · Pearson R · mRNABench MRL-MPRA
- Tested model
- RiNALMo
- Task or benchmark
- Mean ribosome load from MPRA
- Dataset
- mRNABench MRL-MPRA
- Procedure
- Linear probe; mean across ten random seeds.
- Evaluation
- RiNALMo: Mean ribosome load from MPRA
- Evidence
- Independent external evaluation · source checkedmRNABench: A curated benchmark for mature mRNA property and function prediction · Table 2, RiNALMo row, MRL MPRA column
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| RiNALMo: Mean ribosome load from MPRA Linear probe; mean across ten random seeds. Independent external evaluation · Evaluation metadata: needs review | ||
| 0.74 Pearson R Unit: unitless · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedmRNABench: A curated benchmark for mature mRNA property and function prediction · Table 2, RiNALMo row, MRL MPRA column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: source checked
- mRNABench: A curated benchmark for mature mRNA property and function prediction · Original source · preprint archived 2025-07-08
Technical metadata and extraction receipts
Stable ID: lit-009
- areas
- rna-transcriptomes
- tasks
- Mean ribosome load from MPRA
- printed value
- 0.74
- numeric value
- 0.74
- metric
- Pearson R
- metric direction
- unknown
- unit
- unitless
- uncertainty
- Not reported
- source locator
- Table 2, RiNALMo row, MRL MPRA column
- review
- method: independent_ai_table_review; reviewer: Codex omics research agent; independent source-table review, not human review; reviewed at: 2026-09-16T10:41:16.497221+00:00; notes: MRL MPRA is the second task under Local and uses R. Caption specifies mean over ten random seeds and selected best model per family, not a fully identified checkpoint. This verifies the central score at its source location, not every metadata field or an experimental reproduction.; evidence: {"table_xml_id": "T9", "row_cells": ["RiNALMo", "31.6", "0.74", "39.2", "79.5", "69.0", "0.53", "0.42", "0.47", "32.7", "34.7"], "selected_cell_zero_based": 2, "selected_cell_xml": "<td align=\"right\" valign=\"top\" rowspan=\"1\" colspan=\"1\">\n<bold>\n<underline>0.74</underline>\n</bold>\n</td>", "caption": "Linear probe results. Mean of metric over ten random seeds reported. Best model per model family reported, see Appendix D for selected models. Best model for each dataset is and best foundation model is underlined. Models not significantly worse under Wilcoxon signed-rank test at p=0.05 are bolded."}; artifact sha256: 79f6264ee883535203c63a313547e7c57baa85585f76b42f8d899eb17fb7e600; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12265608/fullTextXML
- legacy id
- lit-009
- legacy row
- id: lit-009; paper id: mrnabench-2025; domain id: rna-transcriptomes; task: Mean ribosome load from MPRA; model: RiNALMo; model version: Not reported; dataset: mRNABench MRL-MPRA; dataset version: Not reported; split: Not reported; metric: Pearson R; value: 0.74; unit: unitless; uncertainty: Not reported; protocol: Linear probe; mean across ten random seeds.; source locator: Table 2, RiNALMo row, MRL MPRA column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC12265608/; evaluation origin: independent_paper; reviewed utc: 2026-09-15T23:25:00Z
- missing metadata
- model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract
Related records
- evaluation: RiNALMo: Mean ribosome load from MPRA
- subject: Reported Pearson R for RiNALMo