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benchmark · task

DNA-binding residue prediction

This paper-specific evaluation tests DNA-binding residue prediction using DNA-129_Test.

1 evaluations · 1 metric rows

At a glance

Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.

Data, procedure and scoring
PropertyDescription and evidence
Record typePaper-specific task; protocol incompletely extractedMegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model · Table 2, DNA-129_Test / ESM3 row, AUC column
InputsDNA-129_TestMegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model · Table 2, DNA-129_Test / ESM3 row, AUC column
AssessmentAUCMegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model · Table 2, DNA-129_Test / ESM3 row, AUC column
Recorded split or evaluation settingindependent testMegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model · Table 2, DNA-129_Test / ESM3 row, AUC column
DatasetsNot extracted or verified for this record.
OrganismsNot extracted or verified for this record.
AssaysNot extracted or verified for this record.
AdaptationNot extracted or verified for this record.
BaselinesNot extracted or verified for this record.

How it works

Reported evaluation outline

Outline of the existing paper extraction. Split membership, fitting details and scorer implementation remain incompletely reviewed.

Reported evaluation outlineDNA-129_Test. Then: Recorded fitting or scoring procedure. Then: Assess AUCDNA-129_TestRecorded fitting or scoringprocedureAssess AUC
Read the diagram as text
  1. DNA-129_Test
  2. Recorded fitting or scoring procedure
  3. Assess AUC
MegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model · Table 2, DNA-129_Test / ESM3 row, AUC column

Evaluation context

The existing paper extraction describes: ESM3 multimodal embedding ablation in MegSite. This description is retained with the exact evaluation records; it is not a new protocol reconstruction.

MegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model · Table 2, DNA-129_Test / ESM3 row, AUC column

Tested models and results

Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.

Results grouped by the exact reported evaluation
Metric and findingCoverage and uncertaintyEvidence
MegSite + ESM3: DNA-binding residue prediction

ESM3 multimodal embedding ablation in MegSite

Author-reported evaluation · Evaluation metadata: needs review

0.948 AUC

Unit: fraction · Direction: unknown

Uncertainty: not reported in legacy extract

Scored: Not reported · Eligible: Not reported

source checkedMegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model · Table 2, DNA-129_Test / ESM3 row, AUC column

Source checking is not independent reproduction.

Strengths and limitations

Profile review details

Catalogue extraction inspected; protocol claims remain limited to the cited evidence. Missing details are not presumed absent from the original paper.

Stable record: reported-task-9917a0e69f33e7

Sources and history

Release 2026-09-16-d74d282221a9 · Record review: needs review

Download this release
Technical metadata and extraction receipts

Stable ID: reported-task-9917a0e69f33e7

areas
proteins-complexes
tasks
DNA-binding residue prediction
entity level
task
version
Not reported
task
DNA-binding residue prediction
scope note
Paper-specific evaluation task; protocol completeness requires further extraction.
missing metadata
protocol version: not_reported_in_legacy_extract
Related records

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