result · source checked
0.948 AUC
MegSite + ESM3 · AUC · DNA-129_Test
- Tested model
- MegSite + ESM3
- Task or benchmark
- DNA-binding residue prediction
- Dataset
- DNA-129_Test
- Procedure
- ESM3 multimodal embedding ablation in MegSite
- Evaluation
- MegSite + ESM3: DNA-binding residue prediction
- Evidence
- Author-reported evaluation · source checkedMegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model · Table 2, DNA-129_Test / ESM3 row, AUC column
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| MegSite + ESM3: DNA-binding residue prediction ESM3 multimodal embedding ablation in MegSite Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.948 AUC Unit: fraction · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedMegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model · Table 2, DNA-129_Test / ESM3 row, AUC column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: source checked
- MegSite: an accurate nucleic acid-binding residue prediction method based on multimodal protein language model · Original source · journal full text in PMC
Technical metadata and extraction receipts
Stable ID: b2-megsite-2025
- areas
- proteins-complexes
- tasks
- DNA-binding residue prediction
- printed value
- 0.948
- numeric value
- 0.948
- metric
- AUC
- metric direction
- unknown
- unit
- fraction
- uncertainty
- Not reported
- source locator
- Table 2, DNA-129_Test / ESM3 row, AUC column
- review
- method: independent_ai_table_review; reviewer: Codex secondary table review; reviewed at: 2026-09-16T10:38:57.558213+00:00; notes: Resolved DNA-129_Test row group and ESM3 row. AUC is 0.948; the next numeric cell 0.582 is AP. Caption states an embedding comparison within MegSite.; evidence: Original PMC XML table headers, row groups and caption inspected; printed value 0.948.; artifact sha256: 10d13122331813243d83b84fe6f9294eac7e7c03cde082ebed276191ac41089c; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12496013/fullTextXML
- legacy id
- b2-megsite-2025
- legacy row
- id: b2-megsite-2025; paper id: megsite-2025; domain id: proteins-complexes; task: DNA-binding residue prediction; model: MegSite + ESM3; model version: not stated in table; dataset: DNA-129_Test; dataset version: Not reported; split: independent test; metric: AUC; value: 0.948; unit: fraction; uncertainty: Not reported; protocol: ESM3 multimodal embedding ablation in MegSite; source locator: Table 2, DNA-129_Test / ESM3 row, AUC column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC12496013/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:33:26Z
- missing metadata
- dataset version: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract
Related records
- evaluation: MegSite + ESM3: DNA-binding residue prediction
- subject: Reported AUC for MegSite + ESM3