This paper-specific evaluation tests PBMC cell-type classification using PBMCs-BS.
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Record type | Paper-specific task; protocol incompletely extractedscaLR: a low-resource deep neural network-based platform for single cell analysis and biomarker discovery · Table 2, scaLR row, Cell type Accuracy column; Table 2, Svi-tools (scVI & scANVI) row, Cell type Accuracy column |
| Inputs | PBMCs-BSscaLR: a low-resource deep neural network-based platform for single cell analysis and biomarker discovery · Table 2, scaLR row, Cell type Accuracy column; Table 2, Svi-tools (scVI & scANVI) row, Cell type Accuracy column |
| Assessment | Cell-type accuracyscaLR: a low-resource deep neural network-based platform for single cell analysis and biomarker discovery · Table 2, scaLR row, Cell type Accuracy column; Table 2, Svi-tools (scVI & scANVI) row, Cell type Accuracy column |
| Recorded split or evaluation setting | UnextractedscaLR: a low-resource deep neural network-based platform for single cell analysis and biomarker discovery · Table 2, scaLR row, Cell type Accuracy column; Table 2, Svi-tools (scVI & scANVI) row, Cell type Accuracy column |
| Datasets | Not extracted or verified for this record. |
| Organisms | Not extracted or verified for this record. |
| Assays | Not extracted or verified for this record. |
| Adaptation | Not extracted or verified for this record. |
| Baselines | Not extracted or verified for this record. |
Outline of the existing paper extraction. Split membership, fitting details and scorer implementation remain incompletely reviewed.
The existing paper extraction describes: All features and samples from PBMCs-BS.; All features and samples from PBMCs-BS; comparison pipeline combines scVI and scANVI. This description is retained with the exact evaluation records; it is not a new protocol reconstruction.
scaLR: a low-resource deep neural network-based platform for single cell analysis and biomarker discovery · Table 2, scaLR row, Cell type Accuracy column; Table 2, Svi-tools (scVI & scANVI) row, Cell type Accuracy columnRelease 2026-09-16-d74d282221a9 · 2 evaluations · 2 metric rows. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| scaLR: PBMC cell-type classification All features and samples from PBMCs-BS. Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.942 Cell-type accuracy Unit: unitless · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedscaLR: a low-resource deep neural network-based platform for single cell analysis and biomarker discovery · Table 2, scaLR row, Cell type Accuracy column Source checking is not independent reproduction. |
| scVI + scANVI: PBMC cell-type classification All features and samples from PBMCs-BS; comparison pipeline combines scVI and scANVI. Independent external evaluation · Evaluation metadata: needs review | ||
| 0.939 Cell-type accuracy Unit: unitless · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedscaLR: a low-resource deep neural network-based platform for single cell analysis and biomarker discovery · Table 2, Svi-tools (scVI & scANVI) row, Cell type Accuracy column Source checking is not independent reproduction. |
Catalogue extraction inspected; protocol claims remain limited to the cited evidence. Missing details are not presumed absent from the original paper.
Stable record: reported-task-b46b7b839bff93Release 2026-09-16-d74d282221a9 · Record review: needs review
Stable ID: reported-task-b46b7b839bff93