benchmark · task

Donor-aware age-class prediction

This paper-specific evaluation tests Donor-aware age-class prediction using AIDA v2 PBMC cohort.

At a glance

Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.

Data, procedure and scoring
Property	Description and evidence
Record type	Paper-specific task; protocol incompletely extractedInflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Table 2, AIDA v2 row, scFM BA ± SD column; Table 2, AIDA v2 row, Gene-expr BA column
Inputs	AIDA v2 PBMC cohortInflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Table 2, AIDA v2 row, scFM BA ± SD column; Table 2, AIDA v2 row, Gene-expr BA column
Assessment	Balanced accuracyInflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Table 2, AIDA v2 row, scFM BA ± SD column; Table 2, AIDA v2 row, Gene-expr BA column
Recorded split or evaluation setting	UnextractedInflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Table 2, AIDA v2 row, scFM BA ± SD column; Table 2, AIDA v2 row, Gene-expr BA column
Datasets	Not extracted or verified for this record.
Organisms	Not extracted or verified for this record.
Assays	Not extracted or verified for this record.
Adaptation	Not extracted or verified for this record.
Baselines	Not extracted or verified for this record.

How it works

Reported evaluation outline

Outline of the existing paper extraction. Split membership, fitting details and scorer implementation remain incompletely reviewed.

Read the diagram as text

AIDA v2 PBMC cohort
Recorded fitting or scoring procedure
Assess Balanced accuracy

Inflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Table 2, AIDA v2 row, scFM BA ± SD column; Table 2, AIDA v2 row, Gene-expr BA column

Evaluation context

The existing paper extraction describes: Same donor-aware splits and logistic-regression probe as expression PCA; text names Geneformer as best model on AIDA v2.; Fifty-component gene-expression PCA with the same donor-aware probe splits. This description is retained with the exact evaluation records; it is not a new protocol reconstruction.

Tested models and results

Release 2026-09-16-d74d282221a9 · 2 evaluations · 2 metric rows. Different protocols are not a single leaderboard.

Evaluated configurationMetricEvidence origin

Results grouped by the exact reported evaluation
Metric and finding	Coverage and uncertainty	Evidence
Best frozen single-cell foundation model: Donor-aware age-class prediction Model: Best frozen single-cell foundation model · Benchmark: Donor-aware age-class prediction · Dataset: AIDA v2 PBMC cohort Same donor-aware splits and logistic-regression probe as expression PCA; text names Geneformer as best model on AIDA v2. Independent external evaluation · Evaluation metadata: needs review
0.322 Balanced accuracy Unit: unitless · Direction: unknown	Uncertainty: ± 0.008 standard deviation Scored: Not reported · Eligible: Not reported	source checkedInflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Table 2, AIDA v2 row, scFM BA ± SD column Source checking is not independent reproduction.
Gene-expression PCA: Donor-aware age-class prediction Model: Gene-expression PCA · Benchmark: Donor-aware age-class prediction · Dataset: AIDA v2 PBMC cohort Fifty-component gene-expression PCA with the same donor-aware probe splits. Independent external evaluation · Evaluation metadata: needs review
0.384 Balanced accuracy Unit: unitless · Direction: unknown	Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported	source checkedInflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Table 2, AIDA v2 row, Gene-expr BA column Source checking is not independent reproduction.

Strengths and limitations

Strengths and considerations

The linked evaluation identifies the paper-specific dataset and assessment rather than treating the task name as a universal benchmark.Inflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Table 2, AIDA v2 row, scFM BA ± SD column; Table 2, AIDA v2 row, Gene-expr BA column

Limitations and conditions

The numerical table check does not establish the full data-processing, fitting or leakage-control protocol.Inflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Table 2, AIDA v2 row, scFM BA ± SD column; Table 2, AIDA v2 row, Gene-expr BA column

Profile review details

Catalogue extraction inspected; protocol claims remain limited to the cited evidence. Missing details are not presumed absent from the original paper.

Stable record: reported-task-d6018ca598e525

Sources and history

Release 2026-09-16-d74d282221a9 · Record review: needs review

Inflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Original source · PMC archival version PMC13407579.1

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Technical metadata and extraction receipts

Stable ID: reported-task-d6018ca598e525

areas: cells-tissues
tasks: Donor-aware age-class prediction
entity level: task
version: Not reported
task: Donor-aware age-class prediction
scope note: Paper-specific evaluation task; protocol completeness requires further extraction.
missing metadata: protocol version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract

Related records

dataset: AIDA v2 PBMC cohort
benchmark: Best frozen single-cell foundation model: Donor-aware age-class prediction
benchmark: Gene-expression PCA: Donor-aware age-class prediction

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