Best frozen single-cell foundation model: Donor-aware age-class prediction
Evaluation procedure
Same donor-aware splits and logistic-regression probe as expression PCA; text names Geneformer as best model on AIDA v2.
- Model
- Best frozen single-cell foundation model
- Benchmark
- Donor-aware age-class prediction
- Dataset
- AIDA v2 PBMC cohort
- origin
- Independent external evaluation
- configuration
- Not reported
- protocol id
- Not reported
- dataset version
- 622 donors
- split
- Not reported
- population
- Not reported
- inputs
- Not reported
- adaptation
- Not reported
- metric implementation
- Not reported
- aggregation
- Not reported
- budget
- Not reported
Metadata review: needs review. Unreported conditions prevent automatic comparisons.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| Best frozen single-cell foundation model: Donor-aware age-class prediction Model: Best frozen single-cell foundation model · Benchmark: Donor-aware age-class prediction · Dataset: AIDA v2 PBMC cohort Same donor-aware splits and logistic-regression probe as expression PCA; text names Geneformer as best model on AIDA v2. Independent external evaluation · Evaluation metadata: needs review | ||
| 0.322 Balanced accuracy Unit: unitless · Direction: unknown | Uncertainty: ± 0.008 standard deviation Scored: Not reported · Eligible: Not reported | source checkedInflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Table 2, AIDA v2 row, scFM BA ± SD column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: needs review
- Inflammation-linked aging signals in frozen single-cell foundation models: donor-aware detection and robustness testing · Original source · PMC archival version PMC13407579.1
Technical metadata and extraction receipts
Stable ID: evaluation-lit-b3-013
- areas
- cells-tissues
- tasks
- Donor-aware age-class prediction
- origin
- independent_paper
- protocol
- Same donor-aware splits and logistic-regression probe as expression PCA; text names Geneformer as best model on AIDA v2.
- version
- Not reported
- comparison
- protocol id: Not reported; dataset version: 622 donors; split: Not reported; population: Not reported; inputs: Not reported; adaptation: Not reported; metric implementation: Not reported; aggregation: Not reported; budget: Not reported
- missing metadata
- model version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract