This paper-specific evaluation tests RNA secondary structure using PDB RNA set.
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Record type | Paper-specific task; protocol incompletely extractedDeep generalizable prediction of RNA secondary structure via base pair motif energy · Table 2, BPfold row, PDB F1 column; Table 2, RNAfold row, PDB F1 column |
| Inputs | PDB RNA setDeep generalizable prediction of RNA secondary structure via base pair motif energy · Table 2, BPfold row, PDB F1 column; Table 2, RNAfold row, PDB F1 column |
| Assessment | F1Deep generalizable prediction of RNA secondary structure via base pair motif energy · Table 2, BPfold row, PDB F1 column; Table 2, RNAfold row, PDB F1 column |
| Recorded split or evaluation setting | UnextractedDeep generalizable prediction of RNA secondary structure via base pair motif energy · Table 2, BPfold row, PDB F1 column; Table 2, RNAfold row, PDB F1 column |
| Datasets | Not extracted or verified for this record. |
| Organisms | Not extracted or verified for this record. |
| Assays | Not extracted or verified for this record. |
| Adaptation | Not extracted or verified for this record. |
| Baselines | Not extracted or verified for this record. |
Outline of the existing paper extraction. Split membership, fitting details and scorer implementation remain incompletely reviewed.
The existing paper extraction describes: Family-wise evaluation of canonical base-pair predictions. This description is retained with the exact evaluation records; it is not a new protocol reconstruction.
Deep generalizable prediction of RNA secondary structure via base pair motif energy · Table 2, BPfold row, PDB F1 column; Table 2, RNAfold row, PDB F1 columnRelease 2026-09-16-d74d282221a9 · 2 evaluations · 2 metric rows. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| BPfold: RNA secondary structure Family-wise evaluation of canonical base-pair predictions. Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.814 F1 Unit: unitless · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedDeep generalizable prediction of RNA secondary structure via base pair motif energy · Table 2, BPfold row, PDB F1 column Source checking is not independent reproduction. |
| RNAfold: RNA secondary structure Family-wise evaluation of canonical base-pair predictions. Independent external evaluation · Evaluation metadata: needs review | ||
| 0.747 F1 Unit: unitless · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedDeep generalizable prediction of RNA secondary structure via base pair motif energy · Table 2, RNAfold row, PDB F1 column Source checking is not independent reproduction. |
Catalogue extraction inspected; protocol claims remain limited to the cited evidence. Missing details are not presumed absent from the original paper.
Stable record: reported-task-dc82fcbfb44935Release 2026-09-16-d74d282221a9 · Record review: needs review
Stable ID: reported-task-dc82fcbfb44935