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Hierarchical metagenomic taxonomy classification

This paper-specific evaluation tests Hierarchical metagenomic taxonomy classification using ICCTax Complete dataset.

2 evaluations · 2 metric rows

At a glance

Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.

Data, procedure and scoring
PropertyDescription and evidence
Record typePaper-specific task; protocol incompletely extractedICCTax: a hierarchical taxonomic classifier for metagenomic sequences on a large language model · Table 2, ICCTax row, Genus column; Table 2, Kraken2 row, Genus column
InputsICCTax Complete datasetICCTax: a hierarchical taxonomic classifier for metagenomic sequences on a large language model · Table 2, ICCTax row, Genus column; Table 2, Kraken2 row, Genus column
AssessmentGenus macro AvePICCTax: a hierarchical taxonomic classifier for metagenomic sequences on a large language model · Table 2, ICCTax row, Genus column; Table 2, Kraken2 row, Genus column
Recorded split or evaluation settingUnextractedICCTax: a hierarchical taxonomic classifier for metagenomic sequences on a large language model · Table 2, ICCTax row, Genus column; Table 2, Kraken2 row, Genus column
DatasetsNot extracted or verified for this record.
OrganismsNot extracted or verified for this record.
AssaysNot extracted or verified for this record.
AdaptationNot extracted or verified for this record.
BaselinesNot extracted or verified for this record.

How it works

Reported evaluation outline

Outline of the existing paper extraction. Split membership, fitting details and scorer implementation remain incompletely reviewed.

Reported evaluation outlineICCTax Complete dataset. Then: Recorded fitting or scoring procedure. Then: Assess Genus macro AvePICCTax Complete datasetRecorded fitting or scoringprocedureAssess Genus macro AveP
Read the diagram as text
  1. ICCTax Complete dataset
  2. Recorded fitting or scoring procedure
  3. Assess Genus macro AveP
ICCTax: a hierarchical taxonomic classifier for metagenomic sequences on a large language model · Table 2, ICCTax row, Genus column; Table 2, Kraken2 row, Genus column

Evaluation context

The existing paper extraction describes: Macro average precision at genus rank on Complete dataset. This description is retained with the exact evaluation records; it is not a new protocol reconstruction.

ICCTax: a hierarchical taxonomic classifier for metagenomic sequences on a large language model · Table 2, ICCTax row, Genus column; Table 2, Kraken2 row, Genus column

Tested models and results

Release 2026-09-16-d74d282221a9 · 2 evaluations · 2 metric rows. Different protocols are not a single leaderboard.

Results grouped by the exact reported evaluation
Metric and findingCoverage and uncertaintyEvidence
ICCTax: Hierarchical metagenomic taxonomy classification

Macro average precision at genus rank on Complete dataset.

Author-reported evaluation · Evaluation metadata: needs review

67.20 Genus macro AveP

Unit: % · Direction: unknown

Uncertainty: not reported in legacy extract

Scored: Not reported · Eligible: Not reported

source checkedICCTax: a hierarchical taxonomic classifier for metagenomic sequences on a large language model · Table 2, ICCTax row, Genus column

Source checking is not independent reproduction.

Kraken2: Hierarchical metagenomic taxonomy classification

Macro average precision at genus rank on Complete dataset.

Independent external evaluation · Evaluation metadata: needs review

70.56 Genus macro AveP

Unit: % · Direction: unknown

Uncertainty: not reported in legacy extract

Scored: Not reported · Eligible: Not reported

source checkedICCTax: a hierarchical taxonomic classifier for metagenomic sequences on a large language model · Table 2, Kraken2 row, Genus column

Source checking is not independent reproduction.

Strengths and limitations

Profile review details

Catalogue extraction inspected; protocol claims remain limited to the cited evidence. Missing details are not presumed absent from the original paper.

Stable record: reported-task-f4b1c9373f0929

Sources and history

Release 2026-09-16-d74d282221a9 · Record review: needs review

Download this release
Technical metadata and extraction receipts

Stable ID: reported-task-f4b1c9373f0929

areas
microbes-communities
tasks
Hierarchical metagenomic taxonomy classification
entity level
task
version
Not reported
task
Hierarchical metagenomic taxonomy classification
scope note
Paper-specific evaluation task; protocol completeness requires further extraction.
missing metadata
protocol version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract
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