result · source checked
70.56 Genus macro AveP
Kraken2 · Genus macro AveP · ICCTax Complete dataset
- Tested model
- Kraken2
- Task or benchmark
- Hierarchical metagenomic taxonomy classification
- Dataset
- ICCTax Complete dataset
- Procedure
- Macro average precision at genus rank on Complete dataset.
- Evaluation
- Kraken2: Hierarchical metagenomic taxonomy classification
- Evidence
- Independent external evaluation · source checkedICCTax: a hierarchical taxonomic classifier for metagenomic sequences on a large language model · Table 2, Kraken2 row, Genus column
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| Kraken2: Hierarchical metagenomic taxonomy classification Model: Kraken2 · Benchmark: Hierarchical metagenomic taxonomy classification · Dataset: ICCTax Complete dataset Macro average precision at genus rank on Complete dataset. Independent external evaluation · Evaluation metadata: needs review | ||
| 70.56 Genus macro AveP Unit: % · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedICCTax: a hierarchical taxonomic classifier for metagenomic sequences on a large language model · Table 2, Kraken2 row, Genus column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: source checked
- ICCTax: a hierarchical taxonomic classifier for metagenomic sequences on a large language model · Original source · version of record
Technical metadata and extraction receipts
Stable ID: lit-b3-036
- areas
- microbes-communities
- tasks
- Hierarchical metagenomic taxonomy classification
- printed value
- 70.56
- numeric value
- 70.56
- metric
- Genus macro AveP
- metric direction
- unknown
- unit
- %
- uncertainty
- Not reported
- source locator
- Table 2, Kraken2 row, Genus column
- review
- method: primary_xml_exact_label_cell_check; reviewer: rewire deterministic table checker v1; reviewed at: 2026-09-16T10:33:55.373Z; notes: Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness.; evidence: Table 2, Kraken2 row, Genus column; cell: 70.56; artifact sha256: 2ce0b48f1cde3aea7e561d92f4d7dc1525af7439ccd16f80bec0773e8812c8ec; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12619997/fullTextXML
- legacy id
- lit-b3-036
- legacy row
- id: lit-b3-036; paper id: icctax-2025; domain id: microbes-communities; task: Hierarchical metagenomic taxonomy classification; model: Kraken2; model version: Not reported; dataset: ICCTax Complete dataset; dataset version: Not reported; split: Not reported; metric: Genus macro AveP; value: 70.56; unit: %; uncertainty: Not reported; protocol: Macro average precision at genus rank on Complete dataset.; source locator: Table 2, Kraken2 row, Genus column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC12619997/; evaluation origin: independent_paper; reviewed utc: 2026-09-15T23:29:32Z
- missing metadata
- model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract