CNN (Gorjifard et al.): terminator strength, maize protoplasts
CNN (Gorjifard et al.) as evaluated in the AgroNT paper on the original study's data. Exact fitted checkpoint is unreported.
Overview
CNN (Gorjifard et al.) as evaluated in the AgroNT paper on the original study's data. Exact fitted checkpoint is unreported.
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Evaluations and results
3 evaluations · 3 metric rows. Different protocols are not a single leaderboard.
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Configuration: CNN (Gorjifard et al.): terminator strength, maize protoplasts | Protocol: PGB terminator strength maize protoplasts: A. thaliana: terminator strength prediction Dataset subset: terminator strength test sequences: maize protoplasts: A. thaliana (PGB terminator strength split) | 0.68 r2 coefficient of determination · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · source checkedMethods, coverage and source170 bp assay sequences; original study train/test datasets, as described in Methods Sec21. R² is scored separately by assay system and sequence class. Fitted model checkpoint, seeds and scored counts are not established here. Aggregation: Not reported AgroNT Figure 3f source table · Figures/Fig3_panelf.txt, line 8 (data row 7), column R2; Species=A. thaliana; Model=Maize model; Type=CNN (Gorjifard et al.) |
| Configuration: CNN (Gorjifard et al.): terminator strength, maize protoplasts | Protocol: PGB terminator strength maize protoplasts: randomized GC sequences: terminator strength prediction Dataset subset: terminator strength test sequences: maize protoplasts: randomized GC sequences (PGB terminator strength split) | 0.64 r2 coefficient of determination · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · source checkedMethods, coverage and source170 bp assay sequences; original study train/test datasets, as described in Methods Sec21. R² is scored separately by assay system and sequence class. Fitted model checkpoint, seeds and scored counts are not established here. Aggregation: Not reported AgroNT Figure 3f source table · Figures/Fig3_panelf.txt, line 9 (data row 8), column R2; Species=GC; Model=Maize model; Type=CNN (Gorjifard et al.) |
| Configuration: CNN (Gorjifard et al.): terminator strength, maize protoplasts | Protocol: PGB terminator strength maize protoplasts: Z. mays: terminator strength prediction Dataset subset: terminator strength test sequences: maize protoplasts: Z. mays (PGB terminator strength split) | 0.67 r2 coefficient of determination · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Author-reported evaluation · source checkedMethods, coverage and source170 bp assay sequences; original study train/test datasets, as described in Methods Sec21. R² is scored separately by assay system and sequence class. Fitted model checkpoint, seeds and scored counts are not established here. Aggregation: Not reported AgroNT Figure 3f source table · Figures/Fig3_panelf.txt, line 10 (data row 9), column R2; Species=Z. mays; Model=Maize model; Type=CNN (Gorjifard et al.) |
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Sources and history
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Release 2026-09-23-2b89723c6dd9 · Record review: source checked
2 source records and release history
- AgroNT Figure 3f source table · Original source · 78ec8156c2ffb3e5475277fdb7eb603294224e53
- AgroNT: published methods and Figure 3 · Original source · Version of record, 2024-07-09; retrieved XML snapshot
Technical metadata and extraction receipts
Stable ID: agront-2024-fig3f-method-cnn-gorjifard-et-al-terminator-strength-maize-protoplasts
- areas
- genomics
- source locator
- Fig3_panelf.txt, Type=CNN (Gorjifard et al.), Model=Maize model; Methods: Fine-tuning strategy (Sec16), Promoter and terminator strength prediction (Sec21); Figure 3 caption
- missing metadata
- checkpoint revision: unreported; parameters: unextracted
Related records
- model: CNN (Gorjifard et al.): terminator strength, maize protoplasts on PGB terminator strength maize protoplasts: A. thaliana: terminator strength prediction
- model: CNN (Gorjifard et al.): terminator strength, maize protoplasts on PGB terminator strength maize protoplasts: randomized GC sequences: terminator strength prediction
- model: CNN (Gorjifard et al.): terminator strength, maize protoplasts on PGB terminator strength maize protoplasts: Z. mays: terminator strength prediction