Strengths and considerations
No source-reviewed explanatory claims are recorded here yet.
Configuration
MIST (formula)
MIST as evaluated in the cited study. MassSpecGym paper baseline; chemical-formula-conditioned challenge
Sources
MassSpecGym: A benchmark for the discovery and identification of molecules · Table 3, bonus formula challenge, MIST, Hit rate @1At a glance
Key specifications have not been extracted for this record. See the linked evaluation and sources for the reported setup.
limited source coverage · Automated source review, 2026-09-17. All specifications and missing details
Evaluations and results
Release 2026-09-17-d277315f7d76 · 1 evaluation · 4 metric rows. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| MIST (formula): MassSpecGym · formula Configuration: MIST (formula)Protocol: MassSpecGym · formula (MassSpecGym Molecule retrieval)Dataset: MassSpecGym · formula Retrieve the correct molecule from up to 256 candidates using an input spectrum; compare separately within the main challenge and molecular-formula challenge. MCES single-linkage molecular clustering at threshold 10; fixed held-out test split Author-reported evaluation · Evaluation metadata: needs review | ||
| 41.12 (39.98-42.34)% Hit rate @20 Unit: percent · Direction: higher | Uncertainty: type: bootstrap confidence interval; level: 0.999; resamples: 20000; lower: 39.98; upper: 42.34 Scored: Not reported · Eligible: Not reported | source checkedMassSpecGym: A benchmark for the discovery and identification of molecules · Table 3, bonus formula challenge, MIST, Hit rate @20 Source checking is not independent reproduction. |
| 9.57 (8.88-10.30)% Hit rate @1 Unit: percent · Direction: higher | Uncertainty: type: bootstrap confidence interval; level: 0.999; resamples: 20000; lower: 8.88; upper: 10.30 Scored: Not reported · Eligible: Not reported | source checkedMassSpecGym: A benchmark for the discovery and identification of molecules · Table 3, bonus formula challenge, MIST, Hit rate @1 Source checking is not independent reproduction. |
| 22.11 (21.10-23.13)% Hit rate @5 Unit: percent · Direction: higher | Uncertainty: type: bootstrap confidence interval; level: 0.999; resamples: 20000; lower: 21.10; upper: 23.13 Scored: Not reported · Eligible: Not reported | source checkedMassSpecGym: A benchmark for the discovery and identification of molecules · Table 3, bonus formula challenge, MIST, Hit rate @5 Source checking is not independent reproduction. |
| 12.75 (12.59-12.91) MCES @1 Unit: edge-edit distance · Direction: lower | Uncertainty: type: bootstrap confidence interval; level: 0.999; resamples: 20000; lower: 12.59; upper: 12.91 Scored: Not reported · Eligible: Not reported | source checkedMassSpecGym: A benchmark for the discovery and identification of molecules · Table 3, bonus formula challenge, MIST, MCES @1 Source checking is not independent reproduction. |
How it works
Evaluation in this paper
MassSpecGym paper baseline; chemical-formula-conditioned challenge
Sources
MassSpecGym: A benchmark for the discovery and identification of molecules · Table 3, bonus formula challenge, MIST, Hit rate @1Strengths and limitations
Limitations and conditions
No source-reviewed explanatory claims are recorded here yet.
Profile review details
Primary-source transcription and separate automated review. No human sign-off or experimental reproduction.
Stable record: paper-model-443f59c5d84e63e793Specifications
Inputs, training, access and other details
Explanatory profile: limited source coverage · Automated source review, 2026-09-17. Review applies to the cited claims; unresolved fields are listed below. Numerical results retain their own review status.
| Property | Description and evidence |
|---|---|
| Model type | Not extracted or verified for this record. |
| Inputs | Not extracted or verified for this record. |
| Outputs | Not extracted or verified for this record. |
| Parameters | Not extracted or verified for this record. |
| Known versions | Not extracted or verified for this record. |
| Training data | Not extracted or verified for this record. |
| Context limits | Not extracted or verified for this record. |
| Access | Not extracted or verified for this record. |
| Code licence | Not extracted or verified for this record. |
| Weights licence | Not extracted or verified for this record. |
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
2 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Evaluation in this paper MassSpecGym paper baseline; chemical-formula-conditioned challenge Individual claims | MassSpecGym: A benchmark for the discovery and identification of molecules Table 3, bonus formula challenge, MIST, Hit rate @1 Version: 2410.23326v1 | source checked automated source review · 2026-09-17 Audit detailsPrimary-source transcription and separate automated review. No human sign-off or experimental reproduction. Field: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Introduction MIST as evaluated in the cited study. MassSpecGym paper baseline; chemical-formula-conditioned challenge Individual claims | MassSpecGym: A benchmark for the discovery and identification of molecules Table 3, bonus formula challenge, MIST, Hit rate @1 Version: 2410.23326v1 | source checked automated source review · 2026-09-17 Audit detailsPrimary-source transcription and separate automated review. No human sign-off or experimental reproduction. Field: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
Release 2026-09-17-d277315f7d76 · Record review: needs review
1 source records and release history
- MassSpecGym: A benchmark for the discovery and identification of molecules · Original source · 2410.23326v1
Technical metadata and extraction receipts
Stable ID: paper-model-443f59c5d84e63e793
- areas
- metabolomics
- entity level
- method
- configuration type
- reported_configuration
- version
- MassSpecGym paper baseline; chemical-formula-conditioned challenge
- legacy kinds
- model
- entity classification
- review date: 2026-09-17; rationale: This source-scoped entry preserves the method/configuration actually named in an evaluation. It is neither a global family identity nor proof of an immutable checkpoint; the linked evaluation retains adaptation, fitting and scoring details.; source ids: part2-massspecgym-arxiv-v1; source locator: Table 3, bonus formula challenge, MIST, Hit rate @1; ambiguities: Configuration means the source-labelled evaluated identity. It does not establish missing checkpoint hashes, default settings or equivalence to same-named records in other papers.