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Evaluation

CAFA3 M100 · CAFA3 MFO all organisms; type1 no-knowledge; mode1 · CAFA3 final benchmark; MFO; all; type1; mode1

CAFA3 MFO all organisms; type1 no-knowledge; mode1; CAFA3 final benchmark; MFO; all; type1; mode1. Source checked, not independently reproduced.

Evaluation results

Release 2026-09-19-eb6149e5d766 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard. Charts retain each source table’s protocol and dataset.

Results grouped by the exact reported evaluation
Metric and findingCoverage and uncertaintyEvidence
CAFA3 M100 · CAFA3 MFO all organisms; type1 no-knowledge; mode1 · CAFA3 final benchmark; MFO; all; type1; mode1

CAFA3 MFO all organisms; type1 no-knowledge; mode1

Independent external evaluation · Evaluation metadata: discovered

0.200 F1-max

Unit: fraction · Direction: higher

Aggregation: source F1-max, not bootstrap mean

Uncertainty: kind: source bootstrap summary; printed sd: 0.014; printed mean: 0.203; note: Separate source Avg(B) and Std(B) columns; not a confidence interval on the printed F1-max.

Scored: Not reported · Eligible: Not reported

source checkedCAFA: Figshare 8135393 v3, file 17519846 · supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 103; ID-model=M100; column F1-max

Source checking is not independent reproduction.

Methods and reproduction

CAFA3 MFO all organisms; type1 no-knowledge; mode1; CAFA3 final benchmark; MFO; all; type1; mode1. Source checked, not independently reproduced.

configuration
CAFA3 M100
protocol
CAFA3 MFO all organisms; type1 no-knowledge; mode1 · CAFA3 final benchmark; MFO; all; type1; mode1
dataset subset
CAFA3 final benchmark; MFO; all; type1; mode1
Split
CAFA3 final benchmark; MFO; all; type1; mode1
Adaptation
unreported
Scoring implementation
Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evaluation procedure

CAFA3 MFO all organisms; type1 no-knowledge; mode1

Configuration
CAFA3 M100
Protocol
CAFA3 MFO all organisms; type1 no-knowledge; mode1 · CAFA3 final benchmark; MFO; all; type1; mode1
Dataset subset
CAFA3 final benchmark; MFO; all; type1; mode1
origin
Independent external evaluation
configuration
Not reported
protocol id
acquired-protocol-0841c618c0a89fa56f63
dataset version
Figshare 8135393 v3, file 17519846
split
CAFA3 final benchmark; MFO; all; type1; mode1
population
CAFA3 final benchmark; MFO; all; type1; mode1
inputs
unreported
adaptation
unreported
aggregation
metric-specific; inspect each result

Metadata review: discovered. Unreported conditions prevent automatic comparisons.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

23 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-19-eb6149e5d766
Property and statementOriginal source and locationReview and provenance
attributes.comparison.adaptation

unreported

Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 103; ID-model=M100; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

missing or unspecified

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.adaptation

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.comparison.aggregation

metric-specific; inspect each result

Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 103; ID-model=M100; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.aggregation

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.comparison.dataset_version

Figshare 8135393 v3, file 17519846

Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 103; ID-model=M100; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.dataset_version

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.comparison.inputs

unreported

Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 103; ID-model=M100; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

missing or unspecified

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.inputs

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.comparison.population

CAFA3 final benchmark; MFO; all; type1; mode1

Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 103; ID-model=M100; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.population

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.comparison.protocol_id

acquired-protocol-0841c618c0a89fa56f63

Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 103; ID-model=M100; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.protocol_id

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.comparison.split

CAFA3 final benchmark; MFO; all; type1; mode1

Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 103; ID-model=M100; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.comparison.split

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.conditions.benchmark_type

type1 (no-knowledge, README definition)

Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 103; ID-model=M100; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.conditions.benchmark_type

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.conditions.coverage

0.29

Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 103; ID-model=M100; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.conditions.coverage

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

attributes.conditions.edition

CAFA3

Context-only references
CAFA: Figshare 8135393 v3, file 17519846

Original source ↗

supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 103; ID-model=M100; column F1-max

Version: Figshare 8135393 v3, file 17519846
Retrieved: 2026-09-19

not individually reviewed

No individual claim review recorded

independent paper

Audit details

Field: attributes.conditions.edition

Source artifact SHA-256: a3de18ef5c0aafecc1a2ca27c7c1d8e82b7332bbb9594e389fbd972cc5100b68

Hash scope: SHA-256 of the named archive member; archive SHA-256 recorded separately

Archive member: supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv

Inspected artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-19-eb6149e5d766 · Record review: discovered

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: acquired-evaluation-14550072e95d154a6fc6

origin
independent_paper
protocol
CAFA3 MFO all organisms; type1 no-knowledge; mode1
source locator
supplementary_data/cafa3/sheets/mfo_all_type1_mode1_all_fmax_sheet.csv; line 103; ID-model=M100; column F1-max
conditions
edition: CAFA3; ontology: MFO; benchmark type: type1 (no-knowledge, README definition); evaluation mode: mode1, numeric mode-to-protocol mapping not established by README; organisms: all; participant identity: Anonymized official submission code; no method identity inferred; coverage: 0.29; threshold: 0.89
comparison
protocol id: acquired-protocol-0841c618c0a89fa56f63; dataset version: Figshare 8135393 v3, file 17519846; split: CAFA3 final benchmark; MFO; all; type1; mode1; population: CAFA3 final benchmark; MFO; all; type1; mode1; inputs: unreported; adaptation: unreported; aggregation: metric-specific; inspect each result
missing metadata
checkpoint revision: unreported; scored count: unreported
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