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Evaluation

ESM2-650M likelihood · FLIP2 TrpB by-position; held-out test set · TrpB

FLIP2 TrpB by-position; held-out test set; TrpB. Source checked, not independently reproduced.

Evaluation results

Release 2026-09-19-eb6149e5d766 · 1 evaluation · 2 metric rows. Different protocols are not a single leaderboard. Charts retain each source table’s protocol and dataset.

Results grouped by the exact reported evaluation
Metric and findingCoverage and uncertaintyEvidence
ESM2-650M likelihood · FLIP2 TrpB by-position; held-out test set · TrpB

FLIP2 TrpB by-position; held-out test set

Author-reported evaluation · Evaluation metadata: discovered

0.988 ndcg

Unit: unitless · Direction: higher

Aggregation: reported point estimate

Uncertainty: Not reported

Scored: Not reported · Eligible: Not reported

source checkedFLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A9; row ESM2-650M likelihood; column ndcg

Source checking is not independent reproduction.

0.260 spearman

Unit: correlation · Direction: higher

Aggregation: reported point estimate

Uncertainty: Not reported

Scored: Not reported · Eligible: Not reported

source checkedFLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications · Table A9; row ESM2-650M likelihood; column spearman

Source checking is not independent reproduction.

Methods and reproduction

FLIP2 TrpB by-position; held-out test set; TrpB. Source checked, not independently reproduced.

configuration
ESM2-650M likelihood
protocol
FLIP2 TrpB by-position; held-out test set · TrpB
dataset subset
TrpB
Split
by-position
Adaptation
zero-shot likelihood
Scoring implementation
Not reported

No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.

Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.

Evaluation procedure

FLIP2 TrpB by-position; held-out test set

Configuration
ESM2-650M likelihood
Protocol
FLIP2 TrpB by-position; held-out test set · TrpB
Dataset subset
TrpB
origin
Author-reported evaluation
configuration
Not reported
protocol id
acquired-protocol-ed315b25923fa3e1f9a6
dataset version
Official FLIP2 manuscript; retrieved 2026-09-19; exact bytes pinned
split
by-position
population
TrpB
inputs
unreported
adaptation
zero-shot likelihood
aggregation
metric-specific; inspect each result

Metadata review: discovered. Unreported conditions prevent automatic comparisons.

Evidence table

Inspect claims, sources and review details

Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.

One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.

22 evidence rows matching the loaded filters

Claims, original sources and review scope · Release 2026-09-19-eb6149e5d766
Property and statementOriginal source and locationReview and provenance
attributes.comparison.adaptation

zero-shot likelihood

Context-only references
FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications

Original source ↗

Table A9; row ESM2-650M likelihood; column spearman

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.183348+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.adaptation

Source artifact SHA-256: d0e61ca27863c023adddcc225a3e4af1718f2e3fdfe3642bef89c24c93621a17

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.comparison.aggregation

metric-specific; inspect each result

Context-only references
FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications

Original source ↗

Table A9; row ESM2-650M likelihood; column spearman

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.183348+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.aggregation

Source artifact SHA-256: d0e61ca27863c023adddcc225a3e4af1718f2e3fdfe3642bef89c24c93621a17

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.comparison.dataset_version

Official FLIP2 manuscript; retrieved 2026-09-19; exact bytes pinned

Context-only references
FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications

Original source ↗

Table A9; row ESM2-650M likelihood; column spearman

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.183348+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.dataset_version

Source artifact SHA-256: d0e61ca27863c023adddcc225a3e4af1718f2e3fdfe3642bef89c24c93621a17

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.comparison.inputs

unreported

Context-only references
FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications

Original source ↗

Table A9; row ESM2-650M likelihood; column spearman

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.183348+00:00

missing or unspecified

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.inputs

Source artifact SHA-256: d0e61ca27863c023adddcc225a3e4af1718f2e3fdfe3642bef89c24c93621a17

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.comparison.population

TrpB

Context-only references
FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications

Original source ↗

Table A9; row ESM2-650M likelihood; column spearman

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.183348+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.population

Source artifact SHA-256: d0e61ca27863c023adddcc225a3e4af1718f2e3fdfe3642bef89c24c93621a17

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.comparison.protocol_id

acquired-protocol-ed315b25923fa3e1f9a6

Context-only references
FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications

Original source ↗

Table A9; row ESM2-650M likelihood; column spearman

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.183348+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.protocol_id

Source artifact SHA-256: d0e61ca27863c023adddcc225a3e4af1718f2e3fdfe3642bef89c24c93621a17

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.comparison.split

by-position

Context-only references
FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications

Original source ↗

Table A9; row ESM2-650M likelihood; column spearman

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.183348+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.comparison.split

Source artifact SHA-256: d0e61ca27863c023adddcc225a3e4af1718f2e3fdfe3642bef89c24c93621a17

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.conditions.adaptation

zero-shot likelihood

Context-only references
FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications

Original source ↗

Table A9; row ESM2-650M likelihood; column spearman

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.183348+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.conditions.adaptation

Source artifact SHA-256: d0e61ca27863c023adddcc225a3e4af1718f2e3fdfe3642bef89c24c93621a17

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.conditions.checkpoint_hash

No value recorded

Context-only references
FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications

Original source ↗

Table A9; row ESM2-650M likelihood; column spearman

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.183348+00:00

missing or unspecified

No individual claim review recorded

author reported

Audit details

Field: attributes.conditions.checkpoint_hash

Source artifact SHA-256: d0e61ca27863c023adddcc225a3e4af1718f2e3fdfe3642bef89c24c93621a17

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

attributes.conditions.comparison_scope

Table A9, same metric only

Context-only references
FLIP2: Expanding Protein Fitness Landscape Benchmarks for Real-World Machine Learning Applications

Original source ↗

Table A9; row ESM2-650M likelihood; column spearman

Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Retrieved: 2026-09-17T08:06:28.183348+00:00

not individually reviewed

No individual claim review recorded

author reported

Audit details

Field: attributes.conditions.comparison_scope

Source artifact SHA-256: d0e61ca27863c023adddcc225a3e4af1718f2e3fdfe3642bef89c24c93621a17

Hash scope: Exact retrieved primary paper artifact bytes.

Inspected artifact

Sources and history

View linked audit checks and correction history

Release 2026-09-19-eb6149e5d766 · Record review: discovered

1 source records and release historyDownload this release
Technical metadata and extraction receipts

Stable ID: acquired-evaluation-4c6eb28a935d84a26271

origin
author_reported
protocol
FLIP2 TrpB by-position; held-out test set
source locator
Table A9; row ESM2-650M likelihood; column spearman
conditions
adaptation: zero-shot likelihood; checkpoint hash: Not reported; comparison scope: Table A9, same metric only; eligible count: Not reported; scored count: Not reported; seed count: Not reported; spread definition: unreported in inspected text; do not infer standard deviation
comparison
protocol id: acquired-protocol-ed315b25923fa3e1f9a6; dataset version: Official FLIP2 manuscript; retrieved 2026-09-19; exact bytes pinned; split: by-position; population: TrpB; inputs: unreported; adaptation: zero-shot likelihood; aggregation: metric-specific; inspect each result
missing metadata
checkpoint revision: unreported; scored count: unreported
Related records

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