[Pagès et al., 2019] on ATOM3D PSR-MEAN-RS: Protein structure ranking, mean Spearman within a target
ATOM3D evaluation of [Pagès et al., 2019] on Protein structure ranking, mean Spearman within a target, scored with Spearman r.
Methods and reproduction
ATOM3D evaluation of [Pagès et al., 2019] on Protein structure ranking, mean Spearman within a target, scored with Spearman r.
- task
- ATOM3D PSR-MEAN-RS: Protein structure ranking, mean Spearman within a target
- configuration
- [Pagès et al., 2019]
- dataset subset
- ATOM3D PSR (ATOM3D split)
- Split
- Not reported
- Adaptation
- Not reported
- Scoring implementation
- Spearman r
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evaluation procedure
Trained and scored under the ATOM3D split for this task. Asterisks in the paper mark a run whose training data differed.
- Configuration
- [Pagès et al., 2019]
- Task
- ATOM3D PSR-MEAN-RS: Protein structure ranking, mean Spearman within a target
- Dataset subset
- ATOM3D PSR (ATOM3D split)
- origin
- Author-reported evaluation
- configuration
- Not reported
- protocol id
- atom3d-task-psr-mean-rs
- metric implementation
- Spearman r
Metadata review: source checked. Unreported conditions prevent automatic comparisons.
Evaluation results
Release 2026-09-17-134cd1815de8 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard. Where several source tables report the same metric, the published comparisons above offer a pooled view that names what it does not hold constant.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| [Pagès et al., 2019] on ATOM3D PSR-MEAN-RS: Protein structure ranking, mean Spearman within a target Configuration: [Pagès et al., 2019]Task: ATOM3D PSR-MEAN-RS: Protein structure ranking, mean Spearman within a targetDataset subset: ATOM3D PSR (ATOM3D split) Trained and scored under the ATOM3D split for this task. Asterisks in the paper mark a run whose training data differed. Author-reported evaluation · Evaluation metadata: source checked | ||
| 0.432 spearman_r Unit: correlation · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedATOM3D: Tasks On Molecules in Three Dimensions · Table 6, row(PSR mean RS), column([Pagès et al., 2019]) Source checking is not independent reproduction. |
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
10 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.metric_implementation Spearman r Context-only references | ATOM3D: Tasks On Molecules in Three Dimensions Table 6, row(PSR mean RS), column([Pagès et al., 2019]) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.protocol_id atom3d-task-psr-mean-rs Context-only references | ATOM3D: Tasks On Molecules in Three Dimensions Table 6, row(PSR mean RS), column([Pagès et al., 2019]) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.origin author_reported Context-only references | ATOM3D: Tasks On Molecules in Three Dimensions Table 6, row(PSR mean RS), column([Pagès et al., 2019]) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.protocol Trained and scored under the ATOM3D split for this task. Asterisks in the paper mark a run whose training data differed. Context-only references | ATOM3D: Tasks On Molecules in Three Dimensions Table 6, row(PSR mean RS), column([Pagès et al., 2019]) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator Table 6, row(PSR mean RS), column([Pagès et al., 2019]) Context-only references | ATOM3D: Tasks On Molecules in Three Dimensions Table 6, row(PSR mean RS), column([Pagès et al., 2019]) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| description ATOM3D evaluation of [Pagès et al., 2019] on Protein structure ranking, mean Spearman within a target, scored with Spearman r. Context-only references | ATOM3D: Tasks On Molecules in Three Dimensions Table 6, row(PSR mean RS), column([Pagès et al., 2019]) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: benchmark atom3d-task-psr-mean-rs Context-only references | ATOM3D: Tasks On Molecules in Three Dimensions Table 6, row(PSR mean RS), column([Pagès et al., 2019]) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: dataset atom3d-dataset-atom3d-psr Context-only references | ATOM3D: Tasks On Molecules in Three Dimensions Table 6, row(PSR mean RS), column([Pagès et al., 2019]) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: model atom3d-method-pag-s-et-al-2019 Context-only references | ATOM3D: Tasks On Molecules in Three Dimensions Table 6, row(PSR mean RS), column([Pagès et al., 2019]) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name [Pagès et al., 2019] on ATOM3D PSR-MEAN-RS: Protein structure ranking, mean Spearman within a target Context-only references | ATOM3D: Tasks On Molecules in Three Dimensions Table 6, row(PSR mean RS), column([Pagès et al., 2019]) Version: Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
Release 2026-09-17-134cd1815de8 · Record review: source checked
1 source records and release history
- ATOM3D: Tasks On Molecules in Three Dimensions · Original source · Primary full-text snapshot retrieved 2026-09-17; exact bytes pinned by SHA-256
Technical metadata and extraction receipts
Stable ID: atom3d-evaluation-pag-s-et-al-2019-psr-mean-rs
- areas
- molecular-interactions
- tasks
- Protein structure ranking, mean Spearman within a target
- origin
- author_reported
- protocol
- Trained and scored under the ATOM3D split for this task. Asterisks in the paper mark a run whose training data differed.
- comparison
- protocol id: atom3d-task-psr-mean-rs; metric implementation: Spearman r
- missing metadata
- checkpoint revision: unreported; seeds: unreported; budget: unreported; split manifest: unextracted
- source locator
- Table 6, row(PSR mean RS), column([Pagès et al., 2019])