evaluation · needs review

structure-informed pLM: protein variant-effect classification

Evaluation procedure

combined amino-acid, secondary structure, solvent accessibility and contact-map scoring

Metadata review: needs review. Unreported conditions prevent automatic comparisons.

Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.

Evaluated configurationMetricEvidence origin

Results grouped by the exact reported evaluation
Metric and finding	Coverage and uncertainty	Evidence
structure-informed pLM: protein variant-effect classification Model: structure-informed pLM · Benchmark: protein variant-effect classification · Dataset: variant-effects benchmark combined amino-acid, secondary structure, solvent accessibility and contact-map scoring Author-reported evaluation · Evaluation metadata: needs review
.803 AUROC Unit: fraction · Direction: unknown	Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported	source checkedStructure-Informed Protein Language Models are Robust Predictors for Variant Effects · PMC12068927 HTML, Table4, AA+SS+RSA+CM row, AUROC column Source checking is not independent reproduction.

Release 2026-09-16-d74d282221a9 · Record review: needs review

Technical metadata and extraction receipts

Stable ID: evaluation-b2-structure-informed-plm-2025

areas: proteins-complexes
tasks: protein variant-effect classification
origin: author_reported
protocol: combined amino-acid, secondary structure, solvent accessibility and contact-map scoring
version: not stated in table
comparison: protocol id: Not reported; dataset version: Not reported; split: paper evaluation; population: Not reported; inputs: Not reported; adaptation: Not reported; metric implementation: Not reported; aggregation: Not reported; budget: Not reported
missing metadata: dataset version: not_reported_in_legacy_extract

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