evaluation · needs review
scRegNet (scBERT backbone): Gene-regulatory link prediction
Evaluation procedure
TFs plus 500 variable genes; mean from 50 independent evaluations.
- Model
- scRegNet (scBERT backbone)
- Benchmark
- Gene-regulatory link prediction
- Dataset
- hESC cell-type-specific GRN
- origin
- Author-reported evaluation
- configuration
- Not reported
- protocol id
- Not reported
- dataset version
- Not reported
- split
- Not reported
- population
- Not reported
- inputs
- Not reported
- adaptation
- Not reported
- metric implementation
- Not reported
- aggregation
- Not reported
- budget
- Not reported
Metadata review: needs review. Unreported conditions prevent automatic comparisons.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| scRegNet (scBERT backbone): Gene-regulatory link prediction Model: scRegNet (scBERT backbone) · Benchmark: Gene-regulatory link prediction · Dataset: hESC cell-type-specific GRN TFs plus 500 variable genes; mean from 50 independent evaluations. Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.88 AUROC Unit: unitless · Direction: unknown | Uncertainty: ± 0.00 as printed Scored: Not reported · Eligible: Not reported | source checkedPrediction of Gene Regulatory Connections with Joint Single-Cell Foundation Models and Graph-Based Learning · Table 2, scRegNet (w/ scBERT) row, hESC AUROC entry Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: needs review
- Prediction of Gene Regulatory Connections with Joint Single-Cell Foundation Models and Graph-Based Learning · Original source · PMC11838224.2
Technical metadata and extraction receipts
Stable ID: evaluation-lit-032
- areas
- cells-tissues
- tasks
- Gene-regulatory link prediction
- origin
- author_reported
- protocol
- TFs plus 500 variable genes; mean from 50 independent evaluations.
- version
- Not reported
- comparison
- protocol id: Not reported; dataset version: Not reported; split: Not reported; population: Not reported; inputs: Not reported; adaptation: Not reported; metric implementation: Not reported; aggregation: Not reported; budget: Not reported
- missing metadata
- model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract
Related records
- model: scRegNet (scBERT backbone)
- benchmark: Gene-regulatory link prediction
- dataset: hESC cell-type-specific GRN
- evaluation: scRegNet (scBERT backbone) · AUROC · hESC cell-type-specific GRN