evaluation · needs review
MetaPhlAn3: Metagenomic taxonomic classification
Evaluation procedure
Newly generated sample19 used for classifier comparison.
- Model
- MetaPhlAn3
- Benchmark
- Metagenomic taxonomic classification
- Dataset
- CAMI II Toy human gastrooral sample19-new
- origin
- Independent external evaluation
- configuration
- Not reported
- protocol id
- Not reported
- dataset version
- Not reported
- split
- Not reported
- population
- Not reported
- inputs
- Not reported
- adaptation
- Not reported
- metric implementation
- Not reported
- aggregation
- Not reported
- budget
- Not reported
Metadata review: needs review. Unreported conditions prevent automatic comparisons.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| MetaPhlAn3: Metagenomic taxonomic classification Model: MetaPhlAn3 · Benchmark: Metagenomic taxonomic classification · Dataset: CAMI II Toy human gastrooral sample19-new Newly generated sample19 used for classifier comparison. Independent external evaluation · Evaluation metadata: needs review | ||
| 0.753 F1 score Unit: unitless · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedAdvancing metagenomic classification with NABAS+: a novel alignment-based approach · Table 3, Sample19-new / MetaPhlAn3 row, F1 score column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: needs review
- Advancing metagenomic classification with NABAS+: a novel alignment-based approach · Original source · PMC12231603.1
Technical metadata and extraction receipts
Stable ID: evaluation-lit-040
- areas
- microbes-communities
- tasks
- Metagenomic taxonomic classification
- origin
- independent_paper
- protocol
- Newly generated sample19 used for classifier comparison.
- version
- Not reported
- comparison
- protocol id: Not reported; dataset version: Not reported; split: Not reported; population: Not reported; inputs: Not reported; adaptation: Not reported; metric implementation: Not reported; aggregation: Not reported; budget: Not reported
- missing metadata
- model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract
Related records
- model: MetaPhlAn3
- benchmark: Metagenomic taxonomic classification
- dataset: CAMI II Toy human gastrooral sample19-new
- evaluation: MetaPhlAn3 · F1 score · CAMI II Toy human gastrooral sample19-new