RiNALMo on MIMIC mRNABench probes RNA Localization: RNA Localization prediction
MIMIC mRNABench probes evaluation of RiNALMo on RNA Localization prediction, scored with AUPR.
Evaluation results
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| Tested configuration | Protocol and dataset | Finding | Evidence and details |
|---|---|---|---|
| Pipeline: RiNALMo | Protocol: MIMIC mRNABench probes RNA Localization: RNA Localization prediction Dataset subset: mRNABench RNA Localization as reported in MIMIC Table S11 (MIMIC mRNABench probes split) | 0.690 auprc fraction · higher Uncertainty: Not reported Coverage: Not reported scored / Not reported eligible | Result quoted from another source · source checkedMethods, coverage and sourceRiNALMo on MIMIC mRNABench probes RNA Localization: RNA Localization prediction MIMIC uses concatenated register tokens and mean-pooled RNA-track representations with supervised probes. Nucleotide/codon/amino-acid conditioning is selected per task on validation data; predictions are averaged across selected modality subsets. Comparator scores are quoted from prior mRNABench work. Aggregation: Not reported MIMIC v1: Table S11 and Appendix D.3 · Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization) |
Source checking is not independent reproduction. Release 2026-09-23-2b89723c6dd9.
Evaluation procedure
MIMIC uses concatenated register tokens and mean-pooled RNA-track representations with supervised probes. Nucleotide/codon/amino-acid conditioning is selected per task on validation data; predictions are averaged across selected modality subsets. Comparator scores are quoted from prior mRNABench work.
- Pipeline
- RiNALMo
- Protocol
- MIMIC mRNABench probes RNA Localization: RNA Localization prediction
- Dataset subset
- mRNABench RNA Localization as reported in MIMIC Table S11 (MIMIC mRNABench probes split)
- origin
- Result quoted from another source
- configuration
- Not reported
- protocol id
- mimic-2026-mrnabench-task-rna-localization
- metric implementation
- AUPR
Metadata review: source checked. Unreported conditions prevent automatic comparisons.
Reproduction
- Split
- Not reported
- Adaptation
- Not reported
- Scoring implementation
- AUPR
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evidence
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Evidence table
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14 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.adaptation MIMIC uses concatenated register tokens and mean-pooled RNA-track representations with supervised probes. Nucleotide/codon/amino-acid conditioning is selected per task on validation data; predictions are averaged across selected modality subsets. Comparator scores are quoted from prior mRNABench work. Context-only references | MIMIC v1: Table S11 and Appendix D.3 Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization) Version: arXiv version 1 | not individually reviewed No individual claim review recorded paper compilation Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.metric_implementation AUPR Context-only references | MIMIC v1: Table S11 and Appendix D.3 Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization) Version: arXiv version 1 | not individually reviewed No individual claim review recorded paper compilation Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.comparison.protocol_id mimic-2026-mrnabench-task-rna-localization Context-only references | MIMIC v1: Table S11 and Appendix D.3 Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization) Version: arXiv version 1 | not individually reviewed No individual claim review recorded paper compilation Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.evidence_overlap MIMIC results are reported here; every comparator is explicitly quoted from prior mRNABench work (Appendix D.3), not rerun. Do not count quoted rows as independent experiments. Context-only references | MIMIC v1: Table S11 and Appendix D.3 Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization) Version: arXiv version 1 | not individually reviewed No individual claim review recorded paper compilation Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.origin paper_compilation Context-only references | MIMIC v1: Table S11 and Appendix D.3 Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization) Version: arXiv version 1 | not individually reviewed No individual claim review recorded paper compilation Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.protocol MIMIC uses concatenated register tokens and mean-pooled RNA-track representations with supervised probes. Nucleotide/codon/amino-acid conditioning is selected per task on validation data; predictions are averaged across selected modality subsets. Comparator scores are quoted from prior mRNABench work. Context-only references | MIMIC v1: Table S11 and Appendix D.3 Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization) Version: arXiv version 1 | not individually reviewed No individual claim review recorded paper compilation Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.published_score_reproduction false Context-only references | MIMIC v1: Table S11 and Appendix D.3 Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization) Version: arXiv version 1 | not individually reviewed No individual claim review recorded paper compilation Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.source_locator Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization) Context-only references | MIMIC v1: Table S11 and Appendix D.3 Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization) Version: arXiv version 1 | not individually reviewed No individual claim review recorded paper compilation Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| attributes.suite_complete false Context-only references | MIMIC v1: Table S11 and Appendix D.3 Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization) Version: arXiv version 1 | not individually reviewed No individual claim review recorded paper compilation Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
| description MIMIC mRNABench probes evaluation of RiNALMo on RNA Localization prediction, scored with AUPR. Context-only references | MIMIC v1: Table S11 and Appendix D.3 Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization) Version: arXiv version 1 | not individually reviewed No individual claim review recorded paper compilation Audit detailsField: Source artifact SHA-256: Hash scope: Hash scope not separately documented; inspect source record |
Sources and history
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Release 2026-09-23-2b89723c6dd9 · Record review: source checked
1 source records and release history
- MIMIC v1: Table S11 and Appendix D.3 · Original source · arXiv version 1
Technical metadata and extraction receipts
Stable ID: mimic-2026-mrnabench-evaluation-rinalmo-rna-localization
- areas
- molecular-omics
- tasks
- RNA Localization prediction
- origin
- paper_compilation
- protocol
- MIMIC uses concatenated register tokens and mean-pooled RNA-track representations with supervised probes. Nucleotide/codon/amino-acid conditioning is selected per task on validation data; predictions are averaged across selected modality subsets. Comparator scores are quoted from prior mRNABench work.
- comparison
- protocol id: mimic-2026-mrnabench-task-rna-localization; metric implementation: AUPR
- missing metadata
- checkpoint revision: unreported; seeds: unreported; budget: unreported; split manifest: unextracted
- source locator
- Table S11 (HTML A4.T11), data row 11 (RiNALMo [ 122 ]), column 5 (RNA Localization)
- adaptation
- MIMIC uses concatenated register tokens and mean-pooled RNA-track representations with supervised probes. Nucleotide/codon/amino-acid conditioning is selected per task on validation data; predictions are averaged across selected modality subsets. Comparator scores are quoted from prior mRNABench work.
- evidence overlap
- MIMIC results are reported here; every comparator is explicitly quoted from prior mRNABench work (Appendix D.3), not rerun. Do not count quoted rows as independent experiments.
- published score reproduction
- false
- suite complete
- false