UTR-LM on mRNABench PROT-LOC: Protein localisation
mRNABench evaluation of UTR-LM on Protein localisation, scored with AUPRC (%).
Methods and reproduction
mRNABench evaluation of UTR-LM on Protein localisation, scored with AUPRC (%).
- task
- mRNABench PROT-LOC: Protein localisation
- configuration
- UTR-LM
- dataset subset
- mRNABench Prot Loc (mRNABench split)
- Split
- Not reported
- Adaptation
- Not reported
- Scoring implementation
- AUPRC (%)
No execution recipe has been verified for this exact configuration and evaluation. A benchmark's general instructions may use different inputs, splits or model settings.
Reproducing this published result requires matching its model configuration, data, split and scorer. Source checking or a successful smoke test does not establish score reproduction.
Evaluation procedure
A linear probe over frozen embeddings, scored as the mean over ten random seeds.
- Configuration
- UTR-LM
- Task
- mRNABench PROT-LOC: Protein localisation
- Dataset subset
- mRNABench Prot Loc (mRNABench split)
- origin
- Author-reported evaluation
- configuration
- Not reported
- protocol id
- mrnabench-task-prot-loc
- metric implementation
- AUPRC (%)
Metadata review: source checked. Unreported conditions prevent automatic comparisons.
Evaluation results
Release 2026-09-17-134cd1815de8 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard. Where several source tables report the same metric, the published comparisons above offer a pooled view that names what it does not hold constant.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| UTR-LM on mRNABench PROT-LOC: Protein localisation Configuration: UTR-LMTask: mRNABench PROT-LOC: Protein localisationDataset subset: mRNABench Prot Loc (mRNABench split) A linear probe over frozen embeddings, scored as the mean over ten random seeds. Author-reported evaluation · Evaluation metadata: source checked | ||
| 32.0% auprc Unit: percent · Direction: higher | Uncertainty: Not reported Scored: Not reported · Eligible: Not reported | source checkedmRNABench: A curated benchmark for mature mRNA property and function prediction · Table 2, row(UTR-LM), column(Prot Loc) Source checking is not independent reproduction. |
Evidence table
Inspect claims, sources and review details
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
10 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| attributes.comparison.metric_implementation AUPRC (%) Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(UTR-LM), column(Prot Loc) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.comparison.protocol_id mrnabench-task-prot-loc Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(UTR-LM), column(Prot Loc) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.origin author_reported Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(UTR-LM), column(Prot Loc) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.protocol A linear probe over frozen embeddings, scored as the mean over ten random seeds. Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(UTR-LM), column(Prot Loc) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| attributes.source_locator Table 2, row(UTR-LM), column(Prot Loc) Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(UTR-LM), column(Prot Loc) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| description mRNABench evaluation of UTR-LM on Protein localisation, scored with AUPRC (%). Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(UTR-LM), column(Prot Loc) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: benchmark mrnabench-task-prot-loc Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(UTR-LM), column(Prot Loc) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: dataset mrnabench-dataset-mrnabench-prot-loc Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(UTR-LM), column(Prot Loc) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Relationship: model mrnabench-method-utr-lm Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(UTR-LM), column(Prot Loc) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| name UTR-LM on mRNABench PROT-LOC: Protein localisation Context-only references | mRNABench: A curated benchmark for mature mRNA property and function prediction Table 2, row(UTR-LM), column(Prot Loc) Version: preprint archived 2025-07-08 | not individually reviewed No individual claim review recorded author reported Audit detailsField: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
Release 2026-09-17-134cd1815de8 · Record review: source checked
1 source records and release history
- mRNABench: A curated benchmark for mature mRNA property and function prediction · Original source · preprint archived 2025-07-08
Technical metadata and extraction receipts
Stable ID: mrnabench-evaluation-utr-lm-prot-loc
- areas
- rna-transcriptomes
- tasks
- Protein localisation
- origin
- author_reported
- protocol
- A linear probe over frozen embeddings, scored as the mean over ten random seeds.
- comparison
- protocol id: mrnabench-task-prot-loc; metric implementation: AUPRC (%)
- missing metadata
- checkpoint revision: unreported; seeds: unreported; budget: unreported; split manifest: unextracted
- source locator
- Table 2, row(UTR-LM), column(Prot Loc)
Related records
- benchmark: mRNABench PROT-LOC: Protein localisation
- model: UTR-LM
- dataset: mRNABench Prot Loc (mRNABench split)
- evaluation: UTR-LM · mRNABench PROT-LOC · AUPRC (%)