Strengths and considerations
No source-reviewed explanatory claims are recorded here yet.
Configuration
AA n-grams
AA n-grams as evaluated in the cited study. Paper-specific evaluated pipeline; exact checkpoint not inferred from label
Protein Language Models Expose Viral Immune Mimicry · Table 1, row AA n-grams, column AUC (%); XML row3 column2At a glance
Explanatory profile: limited source coverage · Automated source review, 2026-09-17. Review applies to the cited claims; unresolved fields are listed below. Numerical results retain their own review status.
How it works
Evaluation in this paper
Paper-specific evaluated pipeline; exact checkpoint not inferred from label
Protein Language Models Expose Viral Immune Mimicry · Table 1, row AA n-grams, column AUC (%); XML row3 column2Evaluations and results
Release 2026-09-17-d277315f7d76 · 1 evaluation · 4 metric rows. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| AA n-grams: Held-out human-versus-virus protein classification Configuration: AA n-gramsProtocol: Held-out human-versus-virus protein classification (human-versus-viral protein classification)Dataset: human and viral proteins Compare protein origin classifiers; T 5 embeddings plus linear/tree models vs ESM 2 fine-tuning and simple controls. UniRef90 deduplication; proteins longer than1,600 residues excluded; UniRef50 clusters assigned80% training and20% test with no cluster shared. Separate four-fold error-analysis experiment not assigned toTable1. Author-reported evaluation · Evaluation metadata: needs review | ||
| 91.5% AUROC Unit: percent · Direction: higher | Uncertainty: unreported Scored: Not reported · Eligible: Not reported | source checkedProtein Language Models Expose Viral Immune Mimicry · Table 1, row AA n-grams, column AUC (%); XML row3 column2 Source checking is not independent reproduction. |
| 88.49% Prec. Unit: percent · Direction: higher | Uncertainty: unreported Scored: Not reported · Eligible: Not reported | source checkedProtein Language Models Expose Viral Immune Mimicry · Table 1, row AA n-grams, column Prec.; XML row3 column4 Source checking is not independent reproduction. |
| 88.49% Accur. Unit: percent · Direction: higher | Uncertainty: unreported Scored: Not reported · Eligible: Not reported | source checkedProtein Language Models Expose Viral Immune Mimicry · Table 1, row AA n-grams, column Accur.; XML row3 column3 Source checking is not independent reproduction. |
| 88.49% Recall Unit: percent · Direction: higher | Uncertainty: unreported Scored: Not reported · Eligible: Not reported | source checkedProtein Language Models Expose Viral Immune Mimicry · Table 1, row AA n-grams, column Recall; XML row3 column5 Source checking is not independent reproduction. |
Strengths and limitations
Limitations and conditions
No source-reviewed explanatory claims are recorded here yet.
Profile review details
Primary-source transcription and separate automated review. No human sign-off or experimental reproduction.
Stable record: paper-model-22a4ff45eb1a3fca51Evidence table
Trace each statement to its source and review. A context-only reference supports the record generally; it does not verify an individual field. Source checking does not reproduce an experiment.
One row per statement and cited source. Multiple citations are not independent evaluations. Shared locators are labelled explicitly.
2 evidence rows matching the loaded filters
| Property and statement | Original source and location | Review and provenance |
|---|---|---|
| Evaluation in this paper Paper-specific evaluated pipeline; exact checkpoint not inferred from label Individual claims | Protein Language Models Expose Viral Immune Mimicry Table 1, row AA n-grams, column AUC (%); XML row3 column2 Version: version of record | source checked automated source review · 2026-09-17 Audit detailsPrimary-source transcription and separate automated review. No human sign-off or experimental reproduction. Field: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
| Introduction AA n-grams as evaluated in the cited study. Paper-specific evaluated pipeline; exact checkpoint not inferred from label Individual claims | Protein Language Models Expose Viral Immune Mimicry Table 1, row AA n-grams, column AUC (%); XML row3 column2 Version: version of record | source checked automated source review · 2026-09-17 Audit detailsPrimary-source transcription and separate automated review. No human sign-off or experimental reproduction. Field: Source artifact SHA-256: Hash scope: Exact retrieved primary paper artifact bytes. |
Sources and history
Release 2026-09-17-d277315f7d76 · Record review: needs review
- Protein Language Models Expose Viral Immune Mimicry · Original source · version of record
Technical metadata and extraction receipts
Stable ID: paper-model-22a4ff45eb1a3fca51
- areas
- proteins-complexes
- tasks
- human-versus-viral protein classification
- entity level
- method
- configuration type
- reported_configuration
- version
- Paper-specific evaluated pipeline; exact checkpoint not inferred from label
- legacy kinds
- model
- entity classification
- review date: 2026-09-17; rationale: This source-scoped entry preserves the method/configuration actually named in an evaluation. It is neither a global family identity nor proof of an immutable checkpoint; the linked evaluation retains adaptation, fitting and scoring details.; source ids: part2-viral-immune-mimicry-2025; source locator: Table 1, row AA n-grams, column AUC (%); XML row3 column2; ambiguities: Configuration means the source-labelled evaluated identity. It does not establish missing checkpoint hashes, default settings or equivalence to same-named records in other papers.