Strengths and considerations
No source-reviewed explanatory claims are recorded here yet.
model · method
DNABERT-2
DNABERT-2 is the method recorded for regulatory element identification. This page preserves the configuration reported by DART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA.
At a glance
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Recorded dataset | DART-Eval cCREs versus matched shuffled controlsDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3 (PDF page 5), DNABERT-2 row, Zero-Shot Accuracy column |
| Recorded split | paper evaluationDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3 (PDF page 5), DNABERT-2 row, Zero-Shot Accuracy column |
| Recorded configuration | not stated in tableDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3 (PDF page 5), DNABERT-2 row, Zero-Shot Accuracy column |
| Model type | Not extracted or verified for this record. |
| Training data | Not extracted or verified for this record. |
| Context limits | Not extracted or verified for this record. |
| Access | Not extracted or verified for this record. |
| Code licence | Not extracted or verified for this record. |
| Weights licence | Not extracted or verified for this record. |
How it works
Recorded evaluation
The imported evaluation describes this procedure: zero-shot likelihood ranking: higher likelihood for cCRE than matched control
DART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3 (PDF page 5), DNABERT-2 row, Zero-Shot Accuracy columnBenchmarks and results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| DNABERT-2: regulatory element identification Model: DNABERT-2 · Benchmark: regulatory element identification · Dataset: DART-Eval cCREs versus matched shuffled controls zero-shot likelihood ranking: higher likelihood for cCRE than matched control Independent external evaluation · Evaluation metadata: needs review | ||
| 0.876 accuracy Unit: fraction · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedDART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3 (PDF page 5), DNABERT-2 row, Zero-Shot Accuracy column Source checking is not independent reproduction. |
Strengths and limitations
Limitations and conditions
- This is an evidence-limited profile. The recorded evaluation context does not establish performance on other datasets or configurations.DART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Table 3 (PDF page 5), DNABERT-2 row, Zero-Shot Accuracy column
Profile review details
Reviewed the existing release record, its source pointer and linked evaluation context. This is not a fresh full-text architecture review or independent reproduction; numerical review status is unchanged.
Stable record: reported-model-28413ae1766316Sources and history
Release 2026-09-16-d74d282221a9 · Record review: needs review
- DART-Eval: A Comprehensive DNA Language Model Evaluation Benchmark on Regulatory DNA · Original source · NeurIPS 2024 Datasets and Benchmarks Track proceedings
Technical metadata and extraction receipts
Stable ID: reported-model-28413ae1766316
- areas
- dna-genomes
- entity level
- method
- version
- not stated in table
- reported name
- DNABERT-2
- missing metadata
- checkpoint revision: not_reported_in_legacy_extract; training data: not_reported_in_legacy_extract; licence: not_reported_in_legacy_extract