Strengths and considerations
No source-reviewed explanatory claims are recorded here yet.
model · method
DiffDock holo
DiffDock holo is the method recorded for Intrinsically disordered protein ensemble docking. This page preserves the configuration reported by Ensemble docking for intrinsically disordered proteins.
At a glance
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Recorded dataset | α-synuclein Ligand 47 MD ensembleEnsemble docking for intrinsically disordered proteins · Table 2, Ligand 47 row, DiffDock Holo Docking column |
| Model type | Not extracted or verified for this record. |
| Known versions | Not extracted or verified for this record. |
| Training data | Not extracted or verified for this record. |
| Context limits | Not extracted or verified for this record. |
| Access | Not extracted or verified for this record. |
| Code licence | Not extracted or verified for this record. |
| Weights licence | Not extracted or verified for this record. |
How it works
Recorded evaluation
The imported evaluation describes this procedure: Fraction of docked frames within 3 Å of MD-observed bound pose; holo protein ensemble.
Ensemble docking for intrinsically disordered proteins · Table 2, Ligand 47 row, DiffDock Holo Docking columnBenchmarks and results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| DiffDock holo: Intrinsically disordered protein ensemble docking Model: DiffDock holo · Benchmark: Intrinsically disordered protein ensemble docking · Dataset: α-synuclein Ligand 47 MD ensemble Fraction of docked frames within 3 Å of MD-observed bound pose; holo protein ensemble. Independent external evaluation · Evaluation metadata: needs review | ||
| 21.32 Docked frames best-matched RMSD <3 Å Unit: % · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedEnsemble docking for intrinsically disordered proteins · Table 2, Ligand 47 row, DiffDock Holo Docking column Source checking is not independent reproduction. |
Strengths and limitations
Limitations and conditions
- This is an evidence-limited profile. The recorded evaluation context does not establish performance on other datasets or configurations.Ensemble docking for intrinsically disordered proteins · Table 2, Ligand 47 row, DiffDock Holo Docking column
Profile review details
Reviewed the existing release record, its source pointer and linked evaluation context. This is not a fresh full-text architecture review or independent reproduction; numerical review status is unchanged.
Stable record: reported-model-75e4e5e5965320Sources and history
Release 2026-09-16-d74d282221a9 · Record review: needs review
- Ensemble docking for intrinsically disordered proteins · Original source · preprint archived 2025-01-26
Technical metadata and extraction receipts
Stable ID: reported-model-75e4e5e5965320
- areas
- molecular-interactions
- entity level
- method
- version
- Not reported
- reported name
- DiffDock holo
- missing metadata
- version: not_reported_in_legacy_extract; checkpoint revision: not_reported_in_legacy_extract; training data: not_reported_in_legacy_extract; licence: not_reported_in_legacy_extract