Strengths and considerations
No source-reviewed explanatory claims are recorded here yet.
model · method
PST
PST is the method recorded for Zero-shot variant effect prediction. This page preserves the configuration reported by Endowing protein language models with structural knowledge.
At a glance
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Recorded dataset | ProteinShake VEP datasetsEndowing protein language models with structural knowledge · Table 2, PST row, Zero-shot VEP Mean |ρ| column |
| Model type | Not extracted or verified for this record. |
| Known versions | Not extracted or verified for this record. |
| Training data | Not extracted or verified for this record. |
| Context limits | Not extracted or verified for this record. |
| Access | Not extracted or verified for this record. |
| Code licence | Not extracted or verified for this record. |
| Weights licence | Not extracted or verified for this record. |
How it works
Recorded evaluation
The imported evaluation describes this procedure: Zero-shot VEP; paper averages absolute Spearman correlations.
Endowing protein language models with structural knowledge · Table 2, PST row, Zero-shot VEP Mean |ρ| columnBenchmarks and results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| PST: Zero-shot variant effect prediction Zero-shot VEP; paper averages absolute Spearman correlations. Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.501 Mean |Spearman rho| Unit: unitless · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedEndowing protein language models with structural knowledge · Table 2, PST row, Zero-shot VEP Mean |ρ| column Source checking is not independent reproduction. |
Strengths and limitations
Limitations and conditions
- This is an evidence-limited profile. The recorded evaluation context does not establish performance on other datasets or configurations.Endowing protein language models with structural knowledge · Table 2, PST row, Zero-shot VEP Mean |ρ| column
Profile review details
Reviewed the existing release record, its source pointer and linked evaluation context. This is not a fresh full-text architecture review or independent reproduction; numerical review status is unchanged.
Stable record: reported-model-7dd5992188a868Sources and history
Release 2026-09-16-d74d282221a9 · Record review: needs review
- Endowing protein language models with structural knowledge · Original source · PMC12603367.1
Technical metadata and extraction receipts
Stable ID: reported-model-7dd5992188a868
- areas
- proteins-complexes
- entity level
- method
- version
- Not reported
- reported name
- PST
- missing metadata
- version: not_reported_in_legacy_extract; checkpoint revision: not_reported_in_legacy_extract; training data: not_reported_in_legacy_extract; licence: not_reported_in_legacy_extract