dataset · needs review

ProteinShake VEP datasets

Evaluation results

Release 2026-09-16-d74d282221a9 · 2 evaluations · 2 metric rows. Different protocols are not a single leaderboard.

Evaluated configurationMetricEvidence origin

Results grouped by the exact reported evaluation
Metric and finding	Coverage and uncertainty	Evidence
PST: Zero-shot variant effect prediction Model: PST · Benchmark: Zero-shot variant effect prediction · Dataset: ProteinShake VEP datasets Zero-shot VEP; paper averages absolute Spearman correlations. Author-reported evaluation · Evaluation metadata: needs review
0.501 Mean \|Spearman rho\| Unit: unitless · Direction: unknown	Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported	source checkedEndowing protein language models with structural knowledge · Table 2, PST row, Zero-shot VEP Mean \|ρ\| column Source checking is not independent reproduction.
ESM-2: Zero-shot variant effect prediction Model: ESM-2 · Benchmark: Zero-shot variant effect prediction · Dataset: ProteinShake VEP datasets Zero-shot VEP; paper averages absolute Spearman correlations. Independent external evaluation · Evaluation metadata: needs review
0.489 Mean \|Spearman rho\| Unit: unitless · Direction: unknown	Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported	source checkedEndowing protein language models with structural knowledge · Table 2, ESM-2 row, Zero-shot VEP Mean \|ρ\| column Source checking is not independent reproduction.

Release 2026-09-16-d74d282221a9 · Record review: needs review

Technical metadata and extraction receipts

Stable ID: reported-dataset-bd9255afb783d6

areas: proteins-complexes
version: Not reported
split: Not reported
missing metadata: version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract; accession: not_reported_in_legacy_extract

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