Strengths and considerations
No source-reviewed explanatory claims are recorded here yet.
model · method
Caduceus (character tokens)
Caduceus (character tokens) is the method recorded for regulatory sequence classification. This page preserves the configuration reported by The impact of tokenizer selection in genomic language models.
At a glance
Explanatory profile: limited source coverage · Automated source review, 2026-09-16. This does not change the review status of its results.
| Property | Description and evidence |
|---|---|
| Recorded dataset | genomic benchmark categoriesThe impact of tokenizer selection in genomic language models · Table 2, Regulatory row, Caduceus (char) MCC column |
| Recorded split | paper benchmark summaryThe impact of tokenizer selection in genomic language models · Table 2, Regulatory row, Caduceus (char) MCC column |
| Recorded configuration | 3.9M parameter variantThe impact of tokenizer selection in genomic language models · Table 2, Regulatory row, Caduceus (char) MCC column |
| Model type | Not extracted or verified for this record. |
| Training data | Not extracted or verified for this record. |
| Context limits | Not extracted or verified for this record. |
| Access | Not extracted or verified for this record. |
| Code licence | Not extracted or verified for this record. |
| Weights licence | Not extracted or verified for this record. |
How it works
Recorded evaluation
The imported evaluation describes this procedure: task-category MCC across benchmark datasets
The impact of tokenizer selection in genomic language models · Table 2, Regulatory row, Caduceus (char) MCC columnBenchmarks and results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| Caduceus (character tokens): regulatory sequence classification Model: Caduceus (character tokens) · Benchmark: regulatory sequence classification · Dataset: genomic benchmark categories task-category MCC across benchmark datasets Independent external evaluation · Evaluation metadata: needs review | ||
| 0.778 MCC Unit: unitless · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedThe impact of tokenizer selection in genomic language models · Table 2, Regulatory row, Caduceus (char) MCC column Source checking is not independent reproduction. |
Strengths and limitations
Limitations and conditions
- This is an evidence-limited profile. The recorded evaluation context does not establish performance on other datasets or configurations.The impact of tokenizer selection in genomic language models · Table 2, Regulatory row, Caduceus (char) MCC column
Profile review details
Reviewed the existing release record, its source pointer and linked evaluation context. This is not a fresh full-text architecture review or independent reproduction; numerical review status is unchanged.
Stable record: reported-model-d5bc536ca6f0d3Sources and history
Release 2026-09-16-d74d282221a9 · Record review: needs review
- The impact of tokenizer selection in genomic language models · Original source · journal full text in PMC
Technical metadata and extraction receipts
Stable ID: reported-model-d5bc536ca6f0d3
- areas
- dna-genomes
- entity level
- method
- version
- 3.9M parameter variant
- reported name
- Caduceus (character tokens)
- missing metadata
- checkpoint revision: not_reported_in_legacy_extract; training data: not_reported_in_legacy_extract; licence: not_reported_in_legacy_extract