result · source checked
0.828 AUROC
HyenaDNA · AUROC · DNALongBench ETGP
- Tested model
- HyenaDNA
- Task or benchmark
- Enhancer-target gene prediction
- Dataset
- DNALongBench ETGP
- Procedure
- Long-range ETGP benchmark; source table reports AUROC.
- Evaluation
- HyenaDNA: Enhancer-target gene prediction
- Evidence
- Independent external evaluation · source checkedDNALongBench: A Benchmark Suite for Long-Range DNA Prediction Tasks · Table 3, HyenaDNA row, ETGP column
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| HyenaDNA: Enhancer-target gene prediction Long-range ETGP benchmark; source table reports AUROC. Independent external evaluation · Evaluation metadata: needs review | ||
| 0.828 AUROC Unit: unitless · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedDNALongBench: A Benchmark Suite for Long-Range DNA Prediction Tasks · Table 3, HyenaDNA row, ETGP column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: source checked
- DNALongBench: A Benchmark Suite for Long-Range DNA Prediction Tasks · Original source · PMC11741265.1
Technical metadata and extraction receipts
Stable ID: lit-007
- areas
- dna-genomes
- tasks
- Enhancer-target gene prediction
- printed value
- 0.828
- numeric value
- 0.828
- metric
- AUROC
- metric direction
- unknown
- unit
- unitless
- uncertainty
- Not reported
- source locator
- Table 3, HyenaDNA row, ETGP column
- review
- method: independent_ai_table_review; reviewer: Codex omics research agent; independent source-table review, not human review; reviewed at: 2026-09-16T10:41:16.492545+00:00; notes: ETGP is the first numeric column, separate from the six CMP cell-type columns and average; caption defines ETGP AUROC. This verifies the central score at its source location, not every metadata field or an experimental reproduction.; evidence: {"table_xml_id": "T3", "row_cells": ["HyenaDNA", "0.828", "0.139", "0.122", "0.099", "0.097", "0.118", "0.115"], "selected_cell_zero_based": 1, "selected_cell_xml": "<td align=\"center\" valign=\"middle\" rowspan=\"1\" colspan=\"1\">0.828</td>", "caption": "AUROC for enhancer-target gene prediction (ETGP) task and SCC scores for the contact map prediction (CMP) task. K562, HFF, H1hESC, GM12878, IMR90, and HCT116 represent different human cell types. The highest scores are highlighted in bold. “Avg” means the average score across different cell types. Notably, the Expert Model achieves the best performance on both ETGP and CMP tasks."}; artifact sha256: fa440a17cecf16a5d872d50a30910f7591b5f6f78e10a944c6bda5ea8d7e32dd; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC11741265/fullTextXML
- legacy id
- lit-007
- legacy row
- id: lit-007; paper id: dnalongbench-2025; domain id: dna-genomes; task: Enhancer-target gene prediction; model: HyenaDNA; model version: Not reported; dataset: DNALongBench ETGP; dataset version: Not reported; split: Not reported; metric: AUROC; value: 0.828; unit: unitless; uncertainty: Not reported; protocol: Long-range ETGP benchmark; source table reports AUROC.; source locator: Table 3, HyenaDNA row, ETGP column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC11741265/; evaluation origin: independent_paper; reviewed utc: 2026-09-15T23:25:00Z
- missing metadata
- model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract
Related records
- evaluation: HyenaDNA: Enhancer-target gene prediction
- subject: Reported AUROC for HyenaDNA