result · source checked
0.938 F1
UFold · F1 · RNA8F
- Tested model
- UFold
- Task or benchmark
- RNA secondary structure
- Dataset
- RNA8F
- Procedure
- Three-fold training and evaluation; source reports mean and standard deviation.
- Evaluation
- UFold: RNA secondary structure
- Evidence
- Independent external evaluation · source checkedRNA secondary structure prediction by conducting multi-class classifications · Table 2, UFold row, Overall F1 column
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| UFold: RNA secondary structure Three-fold training and evaluation; source reports mean and standard deviation. Independent external evaluation · Evaluation metadata: needs review | ||
| 0.938 F1 Unit: unitless · Direction: unknown | Uncertainty: ± 0.004 standard deviation Scored: Not reported · Eligible: Not reported | source checkedRNA secondary structure prediction by conducting multi-class classifications · Table 2, UFold row, Overall F1 column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: source checked
- RNA secondary structure prediction by conducting multi-class classifications · Original source · version of record
Technical metadata and extraction receipts
Stable ID: lit-014
- areas
- rna-transcriptomes
- tasks
- RNA secondary structure
- printed value
- 0.938
- numeric value
- 0.938
- metric
- F1
- metric direction
- unknown
- unit
- unitless
- uncertainty
- ± 0.004 standard deviation
- source locator
- Table 2, UFold row, Overall F1 column
- review
- method: independent_ai_table_review; reviewer: Codex omics research agent; independent source-table review, not human review; reviewed at: 2026-09-16T10:41:16.507031+00:00; notes: Overall is the first two-metric block. F1 is first numeric column; source cell includes uncertainty after the preserved central value. This verifies the central score at its source location, not every metadata field or an experimental reproduction.; evidence: {"table_xml_id": "tbl0020", "row_cells": ["UFold", "0.938±0.004", "0.938±0.004", "0.976±0.003", "0.976±0.003", "0.719±0.030", "0.720±0.030"], "selected_cell_zero_based": 1, "selected_cell_xml": "<td colspan=\"1\" rowspan=\"1\">0.938±0.004</td>", "caption": "Main results: the F1 score and the INF score of each method. The largest score in each column is highlighted in bold. The score with an underline is the second largest one in each column. The numbers on the left and right of the ‘±’ suggest the mean and the standard deviation of this score when training and evaluating the model using 3 folds of the dataset."}; artifact sha256: 5aa376d6466daee83fc307baa39fd48da0f185ff30a178624025032d4cbe597d; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC12008525/fullTextXML
- legacy id
- lit-014
- legacy row
- id: lit-014; paper id: tu-fold-2025; domain id: rna-transcriptomes; task: RNA secondary structure; model: UFold; model version: Not reported; dataset: RNA8F; dataset version: Not reported; split: Not reported; metric: F1; value: 0.938; unit: unitless; uncertainty: ± 0.004 standard deviation; protocol: Three-fold training and evaluation; source reports mean and standard deviation.; source locator: Table 2, UFold row, Overall F1 column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC12008525/; evaluation origin: independent_paper; reviewed utc: 2026-09-15T23:25:00Z
- missing metadata
- model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract
Related records
- evaluation: UFold: RNA secondary structure
- subject: Reported F1 for UFold