result · source checked
0.87 Accuracy
ProkBERT-mini · Accuracy · E. coli sigma70 promoter dataset
- Tested model
- ProkBERT-mini
- Task or benchmark
- E. coli sigma70 promoter prediction
- Dataset
- E. coli sigma70 promoter dataset
- Procedure
- Promoter versus non-promoter classification.
- Evaluation
- ProkBERT-mini: E. coli sigma70 promoter prediction
- Evidence
- Author-reported evaluation · source checkedProkBERT family: genomic language models for microbiome applications · Table 3, ProkBERT-mini row, Accuracy column
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| ProkBERT-mini: E. coli sigma70 promoter prediction Model: ProkBERT-mini · Benchmark: E. coli sigma70 promoter prediction · Dataset: E. coli sigma70 promoter dataset Promoter versus non-promoter classification. Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.87 Accuracy Unit: unitless · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedProkBERT family: genomic language models for microbiome applications · Table 3, ProkBERT-mini row, Accuracy column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: source checked
- ProkBERT family: genomic language models for microbiome applications · Original source · PMC10810988.1
Technical metadata and extraction receipts
Stable ID: lit-033
- areas
- microbes-communities
- tasks
- E. coli sigma70 promoter prediction
- printed value
- 0.87
- numeric value
- 0.87
- metric
- Accuracy
- metric direction
- unknown
- unit
- unitless
- uncertainty
- Not reported
- source locator
- Table 3, ProkBERT-mini row, Accuracy column
- review
- method: primary_xml_exact_label_cell_check; reviewer: rewire deterministic table checker v1; reviewed at: 2026-09-16T10:33:36.197Z; notes: Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness.; evidence: Table 3, ProkBERT-mini row, Accuracy column; cell: 0.87; artifact sha256: 8610e2a54aa877c8dc565a9cdb6e82099f284c5e0907a52cab18d994ea732436; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC10810988/fullTextXML
- legacy id
- lit-033
- legacy row
- id: lit-033; paper id: prokbert-2024; domain id: microbes-communities; task: E. coli sigma70 promoter prediction; model: ProkBERT-mini; model version: Not reported; dataset: E. coli sigma70 promoter dataset; dataset version: Not reported; split: Not reported; metric: Accuracy; value: 0.87; unit: unitless; uncertainty: Not reported; protocol: Promoter versus non-promoter classification.; source locator: Table 3, ProkBERT-mini row, Accuracy column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC10810988/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:25:00Z
- missing metadata
- model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract