0.147 Average prophage F1
VirSorter · Average prophage F1 · 20 medium/high-complexity viral simulations
- Tested model
- VirSorter
- Task or benchmark
- Simulated prophage-contig detection
- Dataset
- 20 medium/high-complexity viral simulations
- Procedure
- Average across twenty medium- and high-complexity simulated communities.
- Evaluation
- VirSorter: Simulated prophage-contig detection
- Evidence
- Independent external evaluation · source checkedSimulation study and comparative evaluation of viral contiguous sequence identification tools · Table 3, VirSorter row, Prophage F1 column
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| VirSorter: Simulated prophage-contig detection Model: VirSorter · Benchmark: Simulated prophage-contig detection · Dataset: 20 medium/high-complexity viral simulations Average across twenty medium- and high-complexity simulated communities. Independent external evaluation · Evaluation metadata: needs review | ||
| 0.147 Average prophage F1 Unit: unitless · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedSimulation study and comparative evaluation of viral contiguous sequence identification tools · Table 3, VirSorter row, Prophage F1 column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: source checked
- Simulation study and comparative evaluation of viral contiguous sequence identification tools · Original source · version of record
Technical metadata and extraction receipts
Stable ID: lit-b3-026
- areas
- microbes-communities
- tasks
- Simulated prophage-contig detection
- printed value
- 0.147
- numeric value
- 0.147
- metric
- Average prophage F1
- metric direction
- unknown
- unit
- unitless
- uncertainty
- Not reported
- source locator
- Table 3, VirSorter row, Prophage F1 column
- review
- method: primary_xml_exact_label_cell_check; reviewer: rewire deterministic table checker v1; reviewed at: 2026-09-16T10:33:50.134Z; notes: Exact row/header labels and numeric cell matched. Check verifies transcription, not experimental correctness.; evidence: Table 3, VirSorter row, Prophage F1 column; cell: 0.147; artifact sha256: 93a24652edfa6d9f686862479df3addf50a2d5d432d2d5a31882075fa59dfdfd; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC8207588/fullTextXML
- legacy id
- lit-b3-026
- legacy row
- id: lit-b3-026; paper id: viral-contig-simulation-2021; domain id: microbes-communities; task: Simulated prophage-contig detection; model: VirSorter; model version: Not reported; dataset: 20 medium/high-complexity viral simulations; dataset version: Not reported; split: Not reported; metric: Average prophage F1; value: 0.147; unit: unitless; uncertainty: Not reported; protocol: Average across twenty medium- and high-complexity simulated communities.; source locator: Table 3, VirSorter row, Prophage F1 column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC8207588/; evaluation origin: independent_paper; reviewed utc: 2026-09-15T23:29:32Z
- missing metadata
- model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract