result · source checked
0.917 AUROC
CLAPE-SMB with ESM-2 · AUROC · SJC
- Tested model
- CLAPE-SMB with ESM-2
- Task or benchmark
- protein-small molecule binding-site prediction
- Dataset
- SJC
- Procedure
- Contrastive CLAPE-SMB binding-site predictor with ESM-2 feature extractor
- Evaluation
- CLAPE-SMB with ESM-2: protein-small molecule binding-site prediction
- Evidence
- Author-reported evaluation · source checkedProtein-small molecule binding site prediction based on a pre-trained protein language model with contrastive learning · Table 5, ESM-2 / SJC row, AUROC column
A source-checked result verifies the numerical transcription, not every model or protocol detail. Evaluation metadata: needs review. Source checked does not mean independently reproduced.
Evaluation results
Release 2026-09-16-d74d282221a9 · 1 evaluation · 1 metric row. Different protocols are not a single leaderboard.
| Metric and finding | Coverage and uncertainty | Evidence |
|---|---|---|
| CLAPE-SMB with ESM-2: protein-small molecule binding-site prediction Model: CLAPE-SMB with ESM-2 · Benchmark: protein-small molecule binding-site prediction · Dataset: SJC Contrastive CLAPE-SMB binding-site predictor with ESM-2 feature extractor Author-reported evaluation · Evaluation metadata: needs review | ||
| 0.917 AUROC Unit: fraction · Direction: unknown | Uncertainty: not reported in legacy extract Scored: Not reported · Eligible: Not reported | source checkedProtein-small molecule binding site prediction based on a pre-trained protein language model with contrastive learning · Table 5, ESM-2 / SJC row, AUROC column Source checking is not independent reproduction. |
Sources and history
Release 2026-09-16-d74d282221a9 · Record review: source checked
- Protein-small molecule binding site prediction based on a pre-trained protein language model with contrastive learning · Original source · version of record
Technical metadata and extraction receipts
Stable ID: lit-b4-011
- areas
- proteins-complexes
- tasks
- protein-small molecule binding-site prediction
- printed value
- 0.917
- numeric value
- 0.917
- metric
- AUROC
- metric direction
- unknown
- unit
- fraction
- uncertainty
- Not reported
- source locator
- Table 5, ESM-2 / SJC row, AUROC column
- review
- method: independent_ai_table_review; reviewer: Codex primary curator table review; reviewed at: 2026-09-16T10:41:06Z; notes: ESM-2 on SJC AUROC. Transcription verified; experimental claims not independently reproduced.; evidence: 0.917; artifact sha256: 215919244c3dd2dfb0b55fce91c211430fd8d4aee4bb28bd03eab9f4feb73e62; retrieval url: https://www.ebi.ac.uk/europepmc/webservices/rest/PMC11542454/fullTextXML
- legacy id
- lit-b4-011
- legacy row
- id: lit-b4-011; paper id: clape-smb-2024; domain id: proteins-complexes; task: protein-small molecule binding-site prediction; model: CLAPE-SMB with ESM-2; model version: Not reported; dataset: SJC; dataset version: Not reported; split: Not reported; metric: AUROC; value: 0.917; unit: fraction; uncertainty: Not reported; protocol: Contrastive CLAPE-SMB binding-site predictor with ESM-2 feature extractor; source locator: Table 5, ESM-2 / SJC row, AUROC column; source url: https://pmc.ncbi.nlm.nih.gov/articles/PMC11542454/; evaluation origin: author_reported; reviewed utc: 2026-09-15T23:37:05Z
- missing metadata
- model version: not_reported_in_legacy_extract; dataset version: not_reported_in_legacy_extract; split: not_reported_in_legacy_extract; uncertainty: not_reported_in_legacy_extract